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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_002961
Query referenceOH1004
LocationChr01:62691065-62695578 (+)
DescriptionSimilar to MSR1: Protein MANNAN SYNTHESIS-RELATED 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_002961 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g21190 Glycosyltransferase involved in mannan biosynthesis.
Identification of an additional protein involved in mannan biosynthesis.2013 · DOI: 10.1111/tpj.12019
At1g51630 Glycosyltransferase involved in mannan biosynthesis.
Identification of an additional protein involved in mannan biosynthesis.2013 · DOI: 10.1111/tpj.12019
At1g38065 O-fucosyltransferase 10. No verified direct reference in this release
At1g38131 O-fucosyltransferase 11. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006004fucose metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.904; coverage=63.985; evalue=3.59e-103; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046354mannan biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.904; coverage=63.985; evalue=3.59e-103; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0052325cell wall pectin biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.904; coverage=63.985; evalue=3.59e-103; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071555cell wall organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.938; coverage=64.943; evalue=1.06e-69; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000139Golgi membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.904; coverage=63.985; evalue=3.59e-103; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.684; coverage=65.517; evalue=2.05e-16; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005768endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.904; coverage=63.985; evalue=3.59e-103; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.904; coverage=63.985; evalue=3.59e-103; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005797Golgi medial cisternaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.904; coverage=63.985; evalue=3.59e-103; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005802trans-Golgi networkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.904; coverage=63.985; evalue=3.59e-103; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009505plant-type cell wallCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.401; coverage=64.559; evalue=1.89e-98; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.684; coverage=65.517; evalue=2.05e-16; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.684; coverage=65.517; evalue=3.72e-16; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016757glycosyltransferase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.938; coverage=64.943; evalue=1.06e-69; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051753mannan synthase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.904; coverage=63.985; evalue=3.59e-103; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G38065KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.684; coverage=65.517; evalue=2.05e-16UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G38131KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.684; coverage=65.517; evalue=3.72e-16UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G51630KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.401; coverage=64.559; evalue=1.89e-98UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G21190KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.904; coverage=63.985; evalue=3.59e-103UniProtKB/Swiss-Prot DAT 2026 current_release