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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_002580
Query referenceOH1004
LocationChr01:52343811-52345474 (+)
DescriptionSimilar to NAKR2: Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_002580 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g37390 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2. No verified direct reference in this release
At5g02600 Required for root meristem maintenance after germination.
Arabidopsis NPCC6/NaKR1 is a phloem mobile metal binding protein necessary for phloem function and root meristem maintenance.2010 · DOI: 10.1105/tpc.110.080010
NaKR1 regulates long-distance movement of FLOWERING LOCUS T in Arabidopsis.2016 · DOI: 10.1038/nplants.2016.75
At3g53530 Heavy metal-associated protein involved in salt tolerance.
Overexpression of NaKR3 enhances salt tolerance in Arabidopsis.2016 · DOI: 10.4238/gmr.15016378
At5g27690 Heavy-metal-binding protein. No verified direct reference in this release
At1g66240 Plays an important role in copper homeostasis by conferring tolerance to excess of copper and subclinical copper deficiency during vegetative stage. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006825copper ion transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.077; coverage=48.507; evalue=5.89e-11; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009908flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.606; coverage=49.254; evalue=7.75e-23; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010015root morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.606; coverage=49.254; evalue=7.75e-23; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010233phloem transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.606; coverage=49.254; evalue=7.75e-23; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0055078sodium ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.606; coverage=49.254; evalue=7.75e-23; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.606; coverage=49.254; evalue=7.75e-23; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.606; coverage=49.254; evalue=7.75e-23; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.077; coverage=48.507; evalue=5.89e-11; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005773vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.077; coverage=48.507; evalue=5.89e-11; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.606; coverage=49.254; evalue=7.75e-23; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.077; coverage=48.507; evalue=5.89e-11; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.077; coverage=48.507; evalue=5.89e-11; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.606; coverage=49.254; evalue=7.75e-23; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0099503secretory vesicleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.077; coverage=48.507; evalue=5.89e-11; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.826; coverage=68.657; evalue=1.98e-23; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G66240KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.077; coverage=48.507; evalue=5.89e-11UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G37390KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.826; coverage=68.657; evalue=1.98e-23UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G53530KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.42; coverage=51.493; evalue=1.1e-21UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G02600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.606; coverage=49.254; evalue=7.75e-23UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G27690KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.364; coverage=57.463; evalue=2.61e-10UniProtKB/Swiss-Prot DAT 2026 current_release