Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_002329 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:46304760-46305287 (-) |
| Description | Similar to RER1A: Protein RER1A (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_002329 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g39220 |
Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. | No verified direct reference in this release |
At2g21600 |
Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006621 | protein retention in ER lumen | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.793; coverage=43.939; evalue=3.88e-20; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.793; coverage=43.939; evalue=3.88e-20; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007528 | neuromuscular junction development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.317; coverage=47.727; evalue=1.44e-17; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.317; coverage=47.727; evalue=1.16e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071340 | skeletal muscle acetylcholine-gated channel clustering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.317; coverage=47.727; evalue=1.44e-17; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903078 | positive regulation of protein localization to plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.317; coverage=47.727; evalue=1.44e-17; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.793; coverage=43.939; evalue=3.88e-20; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.793; coverage=43.939; evalue=3.88e-20; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005793 | endoplasmic reticulum-Golgi intermediate compartment | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.317; coverage=47.727; evalue=1.44e-17; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.793; coverage=43.939; evalue=3.88e-20; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005801 | cis-Golgi network | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.517; coverage=43.939; evalue=3.01e-19; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.793; coverage=43.939; evalue=3.88e-20; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009986 | cell surface | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.317; coverage=47.727; evalue=1.44e-17; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033130 | acetylcholine receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.317; coverage=47.727; evalue=1.44e-17; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G21600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.517; coverage=43.939; evalue=3.01e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G39220 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.793; coverage=43.939; evalue=3.88e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:100125922 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.317; coverage=47.727; evalue=1.16e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:419397 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.317; coverage=47.727; evalue=1.41e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:298675 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.317; coverage=47.727; evalue=1.44e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release |