RubberDandelionOmics 橡胶草多组学网站
更多
转录组数据查询 注释 橡胶合成 转录因子预测 靶基因 蛋白关联网络 重测序 工具 下载
ZH EN

本页使用教程

基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDLXL04_002299
当前查询版本OH1004
位置Chr01:45668132-45670441 (-)
描述Similar to CPL1: RNA polymerase II C-terminal domain phosphatase-like 1 (Arabidopsis thaliana OX%3D3702)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_002299 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 37 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At4g21670 连续催化RNA聚合酶Ⅱ最大亚基RPB1的C端结构域中七肽重复序列YSPTSPS的Ser-5去磷酸化，但不催化Ser-2去磷酸化。
Fusion genetic analysis of jasmonate-signalling mutants in Arabidopsis.2002 · DOI: 10.1046/j.0960-7412.2001.01241.x
C-terminal domain phosphatase-like family members (AtCPLs) differentially regulate Arabidopsis thaliana abiotic stress signaling, growth, and development.2002 · DOI: 10.1073/pnas.112276199
Repression of stress-responsive genes by FIERY2, a novel transcriptional regulator in Arabidopsis.2002 · DOI: 10.1073/pnas.162111599
Arabidopsis C-terminal domain phosphatase-like 1 and 2 are essential Ser-5-specific C-terminal domain phosphatases.2004 · DOI: 10.1073/pnas.0403174101
CTD phosphatases in the attenuation of wound-induced transcription of jasmonic acid biosynthetic genes in Arabidopsis.2009 · DOI: 10.1111/j.1365-313x.2008.03663.x
The arabidopsis RNA binding protein with K homology motifs, SHINY1, interacts with the C-terminal domain phosphatase-like 1 (CPL1) to repress stress-inducible gene expression.2013 · DOI: 10.1371/journal.pgen.1003625
The RNA-binding protein HOS5 and serine/arginine-rich proteins RS40 and RS41 participate in miRNA biogenesis in Arabidopsis.2015 · DOI: 10.1093/nar/gkv751
The RNA Polymerase II C-Terminal Domain Phosphatase-Like Protein FIERY2/CPL1 Interacts with eIF4AIII and Is Essential for Nonsense-Mediated mRNA Decay in Arabidopsis.2016 · DOI: 10.1105/tpc.15.00771
At4g16155 复合脂酰胺脱氢酶是质体丙酮酸脱氢酶复合物（PDC）的组成部分。 暂无已核实直接文献
At3g16950 复合脂酰胺脱氢酶是质体丙酮酸脱氢酶复合物（PDC）的组成部分。 暂无已核实直接文献
At5g01270 连续催化RNA聚合酶Ⅱ最大亚基RPB1的C端结构域中七肽重复序列YSPTSPS的Ser-5去磷酸化，但不催化Ser-2去磷酸化。
Arabidopsis C-terminal domain phosphatase-like 1 and 2 are essential Ser-5-specific C-terminal domain phosphatases.2004 · DOI: 10.1073/pnas.0403174101
The Arabidopsis thaliana carboxyl-terminal domain phosphatase-like 2 regulates plant growth, stress and auxin responses.2008 · DOI: 10.1007/s11103-008-9348-y
A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis .2017 · DOI: 10.1073/pnas.1710683114
Coupling of H3K27me3 recognition with transcriptional repression through the BAH-PHD-CPL2 complex in Arabidopsis.2020 · DOI: 10.1038/s41467-020-20089-0

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006086pyruvate decarboxylation to acetyl-CoA生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.556; 覆盖度=11.568; E 值=8.54e-14; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00061032-oxoglutarate metabolic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006970response to osmotic stress生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.577; 覆盖度=35.219; E 值=1.63e-10; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009611response to wounding生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009651response to salt stress生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009733response to auxin生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.577; 覆盖度=35.219; E 值=1.63e-10; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009734auxin-activated signaling pathway生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.577; 覆盖度=35.219; E 值=1.63e-10; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009738abscisic acid-activated signaling pathway生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010468regulation of gene expression生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.577; 覆盖度=35.219; E 值=1.63e-10; UniProt GO evidence=IMP:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034244negative regulation of transcription elongation by RNA polymerase II生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.577; 覆盖度=35.219; E 值=1.63e-10; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045814negative regulation of gene expression, epigenetic生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.577; 覆盖度=35.219; E 值=1.63e-10; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045892negative regulation of DNA-templated transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046685response to arsenic-containing substance生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048589developmental growth生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.577; 覆盖度=35.219; E 值=1.63e-10; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000028regulation of photoperiodism, flowering生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.577; 覆盖度=35.219; E 值=1.63e-10; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.556; 覆盖度=11.568; E 值=8.54e-14; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.577; 覆盖度=35.219; E 值=1.63e-10; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrion细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosol细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membrane细胞组分Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=64.444; 覆盖度=11.568; E 值=8.36e-11; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplast细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009570chloroplast stroma细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelope细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016607nuclear speck细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045252oxoglutarate dehydrogenase complex细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004148dihydrolipoyl dehydrogenase (NADH) activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004721phosphoprotein phosphatase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004722protein serine/threonine phosphatase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IDA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008420RNA polymerase II CTD heptapeptide repeat phosphatase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016791phosphatase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050660flavin adenine dinucleotide binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G16950KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.556; 覆盖度=11.568; E 值=8.54e-14UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G16155KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=2; 一致性=85.366; 覆盖度=10.54; E 值=2.25e-14UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G21670KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=39.64; 覆盖度=57.069; E 值=1.03e-32UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G01270KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.577; 覆盖度=35.219; E 值=1.63e-10UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsyn:slr1096KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=4; 一致性=64.444; 覆盖度=11.568; E 值=8.36e-11UniProtKB/Swiss-Prot DAT 2026 current_release