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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_002238
Query referenceOH1004
LocationChr01:44463656-44467153 (-)
DescriptionSimilar to MNS1: Mannosyl-oligosaccharide 1%2C2-alpha-mannosidase MNS1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_002238 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 19 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g51590 Class I alpha-mannosidase essential for early N-glycan processing.
Two Arabidopsis thaliana Golgi alpha-mannosidase I enzymes are responsible for plant N-glycan maturation.2010 · DOI: 10.1093/glycob/cwp170
Class I alpha-mannosidases are required for N-glycan processing and root development in Arabidopsis thaliana.2009 · DOI: 10.1105/tpc.109.072363
At3g21160 Class I alpha-mannosidase essential for early N-glycan processing.
Two Arabidopsis thaliana Golgi alpha-mannosidase I enzymes are responsible for plant N-glycan maturation.2010 · DOI: 10.1093/glycob/cwp170
Class I alpha-mannosidases are required for N-glycan processing and root development in Arabidopsis thaliana.2009 · DOI: 10.1105/tpc.109.072363

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0005975carbohydrate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006491N-glycan processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0036503ERAD pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045047protein targeting to ERBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.389; coverage=89.329; evalue=9.85e-130; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1904381Golgi apparatus N-glycan mannose trimmingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.054; coverage=88.812; evalue=3.96e-129; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000137Golgi cis cisternaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000139Golgi membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005768endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005793endoplasmic reticulum-Golgi intermediate compartmentCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.389; coverage=89.329; evalue=9.85e-130; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005802trans-Golgi networkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.054; coverage=88.812; evalue=3.96e-129; UniProt GO evidence=HDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031410cytoplasmic vesicleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.389; coverage=89.329; evalue=9.85e-130; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070062extracellular exosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.415; coverage=78.83; evalue=2.19e-129; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004559alpha-mannosidase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004571mannosyl-oligosaccharide 1,2-alpha-mannosidase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005509calcium ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G51590KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.0; coverage=94.664; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G21160KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.479; coverage=100.688; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:10905KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.054; coverage=88.812; evalue=3.96e-129UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:17155KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.389; coverage=89.329; evalue=9.85e-130UniProtKB/Swiss-Prot DAT 2026 current_release