Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_002142`
Query reference	OH1004
Location	Chr01:42588155-42592437 (-)
Description	Similar to CYP90D1: 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_002142 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 16 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g13730`	Involved in brassinosteroid (BR) biosynthesis.	CYP90C1 and CYP90D1 are involved in different steps in the brassinosteroid biosynthesis pathway in Arabidopsis thaliana.2005 · DOI: 10.1111/j.1365-313x.2004.02330.x C-23 hydroxylation by Arabidopsis CYP90C1 and CYP90D1 reveals a novel shortcut in brassinosteroid biosynthesis.2006 · DOI: 10.1105/tpc.106.045443
`At4g36380`	Involved in brassinosteroid (BR) biosynthesis.	Changes in the shapes of leaves and flowers upon overexpression of cytochrome P450 in Arabidopsis.1999 · DOI: 10.1073/pnas.96.16.9433 CYP90C1 and CYP90D1 are involved in different steps in the brassinosteroid biosynthesis pathway in Arabidopsis thaliana.2005 · DOI: 10.1111/j.1365-313x.2004.02330.x C-23 hydroxylation by Arabidopsis CYP90C1 and CYP90D1 reveals a novel shortcut in brassinosteroid biosynthesis.2006 · DOI: 10.1105/tpc.106.045443 The ROTUNDIFOLIA3 gene of Arabidopsis thaliana encodes a new member of the cytochrome P-450 family that is required for the regulated polar elongation of leaf cells.1998 · DOI: 10.1101/gad.12.15.2381

Rice

Reference gene ID	Possible function	Papers / DOI
`Os01g0197100`	Catalyzes the C6-oxidation step in brassinosteroids biosynthesis.	A rice brassinosteroid-deficient mutant, ebisu dwarf (d2), is caused by a loss of function of a new member of cytochrome P450.2003 · DOI: 10.1105/tpc.014712
`UniProt: A2WLP4`	Catalyzes the C6-oxidation step in brassinosteroids biosynthesis (By similarity).	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0009965	leaf morphogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.299; coverage=87.008; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010268	brassinosteroid homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016125	sterol metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.556; coverage=87.795; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016132	brassinosteroid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042814	monopolar cell growth	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.299; coverage=87.008; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048366	leaf development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048441	petal development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048443	stamen development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.78; coverage=87.795; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005506	iron ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008395	steroid hydroxylase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.299; coverage=87.008; evalue=0.0; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0020037	heme binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0102097	22alpha-hydroxysteroid 23-monooxygenase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G13730	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.306; coverage=86.811; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G36380	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.299; coverage=87.008; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	bdi:100839691	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.315; coverage=98.228; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os01g0197100	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.78; coverage=87.795; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release