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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_002071
Query referenceOH1004
LocationChr01:41321280-41324585 (-)
DescriptionSimilar to At2g18220: Nucleolar complex protein 2 homolog (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_002071 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g55510 Collaboratively with CYP40/SQN and ULT1, influences floral meristem (FM) determinacy in an AGAMOUS and SUPERMAN-dependent manner, thus contributing to the floral developmental homeostasis. No verified direct reference in this release
At2g18220 Together with SWA2, probably involved in pre-ribosome export from the nucleus to the cytoplasm.
SLOW WALKER2, a NOC1/MAK21 homologue, is essential for coordinated cell cycle progression during female gametophyte development in Arabidopsis.2009 · DOI: 10.1104/pp.109.142414

Rice

Reference gene IDPossible functionPapers / DOI
Os10g0495500 Nucleolar complex protein 2 homolog. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000122negative regulation of transcription by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.429; coverage=76.19; evalue=6.09e-55; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.429; coverage=76.19; evalue=6.09e-55; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010582floral meristem determinacyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=68.571; evalue=3.67e-176; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042273ribosomal large subunit biogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=68.571; evalue=3.67e-176; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=68.571; evalue=3.67e-176; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=68.571; evalue=3.67e-176; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=68.571; evalue=3.67e-176; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030690Noc1p-Noc2p complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=68.571; evalue=3.67e-176; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030691Noc2p-Noc3p complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=68.571; evalue=3.67e-176; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003714transcription corepressor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.429; coverage=76.19; evalue=6.09e-55; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042393histone bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.429; coverage=76.19; evalue=6.09e-55; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.053; coverage=76.463; evalue=2.21e-113; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042803protein homodimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.053; coverage=76.463; evalue=2.21e-113; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G18220KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.053; coverage=76.463; evalue=2.21e-113UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G55510KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=68.571; evalue=3.67e-176UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbta:508638KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.429; coverage=76.19; evalue=6.09e-55UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os10g0495500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.507; coverage=79.456; evalue=2.65e-98UniProtKB/Swiss-Prot DAT 2026 current_release