Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_001845 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:34924018-34926068 (+) |
| Description | Similar to IBR5: Protein-tyrosine-phosphatase IBR5 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_001845 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 41 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g04550 |
Required for the transduction of auxin and abscisic acid (ABA) signaling pathways. |
IBR5, a dual-specificity phosphatase-like protein modulating auxin and abscisic acid responsiveness in Arabidopsis.2003 · DOI: 10.1105/tpc.017046 The IBR5 phosphatase promotes Arabidopsis auxin responses through a novel mechanism distinct from TIR1-mediated repressor degradation.2008 · DOI: 10.1186/1471-2229-8-41
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006470 | protein dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.25; coverage=66.165; evalue=1.32e-23; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007162 | negative regulation of cell adhesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008285 | negative regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009738 | abscisic acid-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032355 | response to estradiol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032526 | response to retinoic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032870 | cellular response to hormone stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033574 | response to testosterone | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035335 | peptidyl-tyrosine dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.25; coverage=66.165; evalue=1.32e-23; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035556 | intracellular signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105; UniProt GO evidence=IC:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035970 | peptidyl-threonine dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042542 | response to hydrogen peroxide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043409 | negative regulation of MAPK cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046620 | regulation of organ growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.955; coverage=66.165; evalue=2.07e-24; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051384 | response to glucocorticoid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051447 | negative regulation of meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051591 | response to cAMP | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051592 | response to calcium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061388 | regulation of rate of cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070262 | peptidyl-serine dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070371 | ERK1 and ERK2 cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.25; coverage=66.165; evalue=1.32e-23; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070373 | negative regulation of ERK1 and ERK2 cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090266 | regulation of mitotic cell cycle spindle assembly checkpoint | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903753 | negative regulation of p38MAPK cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990869 | cellular response to chemokine | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000279 | negative regulation of DNA biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004721 | phosphoprotein phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004722 | protein serine/threonine phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004725 | protein tyrosine phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017017 | MAP kinase tyrosine/serine/threonine phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019838 | growth factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033549 | MAP kinase phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051019 | mitogen-activated protein kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G04550 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.41; coverage=101.88; evalue=6.93e-105 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:1843 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.348; coverage=75.564; evalue=5.39e-25 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:19252 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.25; coverage=66.165; evalue=1.32e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:114856 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.818; coverage=66.165; evalue=1.43e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:380262 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.955; coverage=66.165; evalue=2.07e-24 | UniProtKB/Swiss-Prot DAT 2026 current_release |