基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_001718 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:31997336-31998675 (+) |
| 描述 | Similar to PME11: Putative pectinesterase 11 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_001718 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 13 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g21610 |
通过细胞壁果胶的去甲基酯化作用来修饰细胞壁。 | 暂无已核实直接文献 |
At5g19730 |
通过细胞壁果胶的去甲基酯化作用来修饰细胞壁。 | 暂无已核实直接文献 |
At5g47500 |
通过细胞壁果胶的去甲基酯化作用来修饰细胞壁。 | 暂无已核实直接文献 |
At5g55590 |
细胞类型特异性果胶降解以分离小孢子所需的果胶酯酶。 |
Separation of Arabidopsis pollen tetrads is regulated by QUARTET1, a pectin methylesterase gene.2006 · DOI: 10.1104/pp.106.085274
|
At3g17060 |
通过细胞壁果胶的去甲基酯化作用来修饰细胞壁。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0009408 | response to heat | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.485; 覆盖度=87.683; E 值=2.1e-91; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.485; 覆盖度=87.683; E 值=2.1e-91; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010588 | cotyledon vascular tissue pattern formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.485; 覆盖度=87.683; E 值=2.1e-91; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042545 | cell wall modification | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.245; 覆盖度=86.217; E 值=3.83e-141; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045490 | pectin catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.245; 覆盖度=86.217; E 值=3.83e-141; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.809; 覆盖度=87.683; E 值=7.31e-83; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.485; 覆盖度=87.683; E 值=2.1e-91; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.245; 覆盖度=86.217; E 值=3.83e-141; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.485; 覆盖度=87.683; E 值=2.1e-91; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.485; 覆盖度=87.683; E 值=2.1e-91; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.245; 覆盖度=86.217; E 值=3.83e-141; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.485; 覆盖度=87.683; E 值=2.1e-91; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030599 | pectinesterase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.245; 覆盖度=86.217; E 值=3.83e-141; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G21610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.245; 覆盖度=86.217; E 值=3.83e-141 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G17060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.759; 覆盖度=97.361; E 值=9.19e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G19730 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.485; 覆盖度=87.683; E 值=2.1e-91 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G47500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.809; 覆盖度=87.683; E 值=7.31e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G55590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=44.333; 覆盖度=87.977; E 值=1.75e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release |