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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_001443
Query referenceOH1004
LocationChr01:26961824-26966384 (+)
DescriptionSimilar to 2ODD19: 2-oxoglutarate-dependent dioxygenase 19 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_001443 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g10500 Converts salicylic acid (SA) to both 2,3-dihydroxybenzoic acid (2,3-DHBA) and 2,5-DHBA in vitro but only 2,3-DHBA in vivo.
DOWNY MILDEW RESISTANT 6 and DMR6-LIKE OXYGENASE 1 are partially redundant but distinct suppressors of immunity in Arabidopsis.2015 · DOI: 10.1111/tpj.12719
At4g10490 Converts salicylic acid (SA) to 2,3-dihydroxybenzoic acid (2,3-DHBA) (By similarity).
DOWNY MILDEW RESISTANT 6 and DMR6-LIKE OXYGENASE 1 are partially redundant but distinct suppressors of immunity in Arabidopsis.2015 · DOI: 10.1111/tpj.12719

Rice

Reference gene IDPossible functionPapers / DOI
Os08g0480200 Involved in melatonin degradation. No verified direct reference in this release
Os08g0560000 Involved in the regulation of shoot development and salicylic acid (SA) homeostasis. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0002229defense response to oomycetesBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.881; coverage=48.415; evalue=2.63e-69; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0002239response to oomycetesBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.881; coverage=48.415; evalue=2.63e-69; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009617response to bacteriumBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.881; coverage=48.415; evalue=2.63e-69; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009620response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.881; coverage=48.415; evalue=2.63e-69; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009751response to salicylic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.881; coverage=48.415; evalue=2.63e-69; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010150leaf senescenceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.881; coverage=48.415; evalue=2.63e-69; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046244salicylic acid catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.881; coverage=48.415; evalue=2.63e-69; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.086; coverage=40.058; evalue=1.63e-60; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.954; coverage=47.118; evalue=1.26e-85; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.881; coverage=48.415; evalue=2.63e-69; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00167062-oxoglutarate-dependent dioxygenase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.086; coverage=40.058; evalue=1.63e-60; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031418L-ascorbic acid bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.954; coverage=47.118; evalue=1.26e-85; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.954; coverage=47.118; evalue=1.26e-85; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051213dioxygenase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.954; coverage=47.118; evalue=1.26e-85; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G10490KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.235; coverage=48.991; evalue=2.22e-66UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G10500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.881; coverage=48.415; evalue=2.63e-69UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os08g0480200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.954; coverage=47.118; evalue=1.26e-85UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os08g0560000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.086; coverage=40.058; evalue=1.63e-60UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4345848KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.954; coverage=47.118; evalue=1.26e-85UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4346321KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.086; coverage=40.058; evalue=1.63e-60UniProtKB/Swiss-Prot DAT 2026 current_release