基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_000567 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:10386252-10387109 (-) |
| 描述 | Similar to TAF13: Transcription initiation factor TFIID subunit 13 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_000567 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 18 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g02680 |
TAF 是转录因子 IID 复合物的组成部分,对于介导 RNA 聚合酶转录的调节至关重要。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006352 | DNA-templated transcription initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006366 | transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.973; 覆盖度=86.719; E 值=2.82e-56; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006367 | transcription initiation at RNA polymerase II promoter | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.25; 覆盖度=75.0; E 值=1.03e-31; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.973; 覆盖度=86.719; E 值=2.82e-56; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009960 | endosperm development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.973; 覆盖度=86.719; E 值=2.82e-56; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042789 | mRNA transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.973; 覆盖度=86.719; E 值=2.82e-56; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051123 | RNA polymerase II preinitiation complex assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060261 | positive regulation of transcription initiation by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.973; 覆盖度=86.719; E 值=2.82e-56; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005669 | transcription factor TFIID complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.25; 覆盖度=75.0; E 值=1.03e-31; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.973; 覆盖度=86.719; E 值=2.82e-56; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016251 | RNA polymerase II general transcription initiation factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31; UniProt GO evidence=IC:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017025 | TBP-class protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046982 | protein heterodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.973; 覆盖度=86.719; E 值=2.82e-56; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G02680 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.973; 覆盖度=86.719; E 值=2.82e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0292838 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.25; 覆盖度=75.0; E 值=1.03e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:6884 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:99730 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100172778 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.447; 覆盖度=73.438; E 值=1.33e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release |