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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_000273
Query referenceOH1004
LocationChr01:5202467-5204783 (-)
DescriptionSimilar to Ras-related protein Rab7 (Glycine max OX%3D3847)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000273 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g09720 Intracellular vesicle trafficking and protein transport. No verified direct reference in this release
At1g22740 Intracellular vesicle trafficking and protein transport.
The Rab GTPase RabG3b functions in autophagy and contributes to tracheary element differentiation in Arabidopsis.2010 · DOI: 10.1111/j.1365-313x.2010.04315.x
At2g21880 Intracellular vesicle trafficking and protein transport. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0010089xylem developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.0; coverage=84.388; evalue=5.45e-98; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010508positive regulation of autophagyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.0; coverage=84.388; evalue=5.45e-98; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010623programmed cell death involved in cell developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.0; coverage=84.388; evalue=5.45e-98; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015031protein transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.637; coverage=84.81; evalue=1.61e-105; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1905177tracheary element differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.0; coverage=84.388; evalue=5.45e-98; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000325plant-type vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.149; coverage=84.81; evalue=4.86e-101; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.0; coverage=84.388; evalue=5.45e-98; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.149; coverage=84.81; evalue=4.86e-101; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005773vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.507; coverage=88.186; evalue=4.03e-94; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005774vacuolar membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.637; coverage=84.81; evalue=1.61e-105; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.149; coverage=84.81; evalue=4.86e-101; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.149; coverage=84.81; evalue=4.86e-101; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.637; coverage=84.81; evalue=1.61e-105; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003924GTPase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.637; coverage=84.81; evalue=1.61e-105; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005525GTP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.637; coverage=84.81; evalue=1.61e-105; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G22740KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.0; coverage=84.388; evalue=5.45e-98UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G21880KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.507; coverage=88.186; evalue=4.03e-94UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G09720KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.149; coverage=84.81; evalue=4.86e-101UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGgmx:100785104KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.637; coverage=84.81; evalue=1.61e-105UniProtKB/Swiss-Prot DAT 2026 current_release