基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA07G075140 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr07:19645047-19649035 (+) |
| 描述 | Similar to BRCA1: Protein BREAST CANCER SUSCEPTIBILITY 1 homolog (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_027587 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 39 条 GO 注释和 2 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g21070 |
在 DNA 修复和细胞周期控制中发挥作用。 | |
At1g04020 |
特异性结合WUS、WOX5等靶基因启动子的H3K4me3区域,通过染色质重塑抑制其转录。 |
A homologue of the breast cancer-associated gene BARD1 is involved in DNA repair in plants.2006 · DOI: 10.1038/sj.emboj.7601313
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000724 | double-strand break repair via homologous recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.941; 覆盖度=48.511; E 值=5.16e-130; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.941; 覆盖度=48.511; E 值=5.16e-130; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006282 | regulation of DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.941; 覆盖度=48.511; E 值=5.16e-130; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.591; 覆盖度=47.022; E 值=1.1e-100; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009934 | regulation of meristem structural organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.591; 覆盖度=47.022; E 值=1.1e-100; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010078 | maintenance of root meristem identity | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.591; 覆盖度=47.022; E 值=1.1e-100; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010332 | response to gamma radiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.941; 覆盖度=48.511; E 值=5.16e-130; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010492 | maintenance of shoot apical meristem identity | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.591; 覆盖度=47.022; E 值=1.1e-100; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035825 | homologous recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042325 | regulation of phosphorylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044818 | mitotic G2/M transition checkpoint | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045787 | positive regulation of cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.591; 覆盖度=47.022; E 值=1.1e-100; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.941; 覆盖度=48.511; E 值=5.16e-130; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046826 | negative regulation of protein export from nucleus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.591; 覆盖度=47.022; E 值=1.1e-100; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0065004 | protein-DNA complex assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.591; 覆盖度=47.022; E 值=1.1e-100; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071479 | cellular response to ionizing radiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071480 | cellular response to gamma radiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.941; 覆盖度=48.511; E 值=5.16e-130; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0085020 | protein K6-linked ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0110025 | DNA strand resection involved in replication fork processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000001 | regulation of DNA damage checkpoint | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000152 | nuclear ubiquitin ligase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.941; 覆盖度=48.511; E 值=5.16e-130; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036464 | cytoplasmic ribonucleoprotein granule | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070532 | BRCA1-B complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070533 | BRCA1-C complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.591; 覆盖度=47.022; E 值=1.1e-100; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.941; 覆盖度=48.511; E 值=5.16e-130; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.941; 覆盖度=48.511; E 值=5.16e-130; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046982 | protein heterodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G21070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.941; 覆盖度=48.511; E 值=5.16e-130 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:12021 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.397; 覆盖度=18.734; E 值=4.47e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release |