基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA07G041050 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr07:10990621-10992083 (-) |
| 描述 | Similar to At3g02770: Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_027238 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 10 条 GO 注释和 6 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g03510 |
E3 泛素蛋白连接酶,促进水通道蛋白 PIP2-1 的泛素化和蛋白酶体降解。 |
Rma1, a novel type of RING finger protein conserved from Arabidopsis to human, is a membrane-bound ubiquitin ligase.2001 · DOI: 10.1242/jcs.114.10.1949
|
At4g27470 |
E3 泛素蛋白连接酶。 | |
At4g28270 |
E3 泛素蛋白连接酶,可促进生长素结合蛋白 ERABP1 的泛素化和蛋白酶体降解。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0051252 | regulation of RNA metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.133; 覆盖度=43.005; E 值=2.01e-97; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=70.482; 覆盖度=43.005; E 值=8.17e-79; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.133; 覆盖度=43.005; E 值=2.01e-97; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.133; 覆盖度=43.005; E 值=2.01e-97; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=70.482; 覆盖度=43.005; E 值=8.17e-79; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=82.53; 覆盖度=43.005; E 值=5.82e-96; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008428 | ribonuclease inhibitor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.133; 覆盖度=43.005; E 值=2.01e-97; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008948 | oxaloacetate decarboxylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.133; 覆盖度=43.005; E 值=2.01e-97; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.133; 覆盖度=43.005; E 值=2.01e-97; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0047443 | 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.133; 覆盖度=43.005; E 值=2.01e-97; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G02770 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.133; 覆盖度=43.005; E 值=2.01e-97 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G16450 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=82.53; 覆盖度=43.005; E 值=5.82e-96 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G56260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=70.482; 覆盖度=43.005; E 值=8.17e-79 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bmj:BMULJ_02024 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.875; 覆盖度=41.451; E 值=8.63e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bmu:Bmul_1223 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.875; 覆盖度=41.451; E 值=8.63e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | reu:Reut_A1963 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=53.416; 覆盖度=41.71; E 值=5.75e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release |