基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA05G057890 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr05:15397867-15400327 (+) |
| 描述 | Similar to TIF3E1: Eukaryotic translation initiation factor 3 subunit E (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_019520 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g57290 |
真核翻译起始因子3(eIF-3)复合体的组成部分,参与特定mRNA的蛋白质合成,并与其他起始因子一起促进mRNA和起始甲硫氨酸-tRNA与40S核糖体的结合。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.596; 覆盖度=97.955; E 值=1.4e-160; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001732 | formation of cytoplasmic translation initiation complex | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006352 | DNA-templated transcription initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006412 | translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006413 | translational initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006874 | intracellular calcium ion homeostasis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.596; 覆盖度=97.955; E 值=1.48e-160; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045727 | positive regulation of translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.596; 覆盖度=97.955; E 值=1.48e-160; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090316 | positive regulation of intracellular protein transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.596; 覆盖度=97.955; E 值=1.48e-160; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005852 | eukaryotic translation initiation factor 3 complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008180 | COP9 signalosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016282 | eukaryotic 43S preinitiation complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031597 | cytosolic proteasome complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033290 | eukaryotic 48S preinitiation complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071540 | eukaryotic translation initiation factor 3 complex, eIF3e | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003743 | translation initiation factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030371 | translation repressor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044325 | transmembrane transporter binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.596; 覆盖度=97.955; E 值=1.48e-160; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G57290 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.598; 覆盖度=98.864; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:534165 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.596; 覆盖度=97.955; E 值=1.4e-160 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | nve:5516169 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=55.196; 覆盖度=98.409; E 值=6.99e-169 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100173055 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=53.596; 覆盖度=97.955; E 值=1.48e-160 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:299872 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.596; 覆盖度=97.955; E 值=1.48e-160 | UniProtKB/Swiss-Prot DAT 2026 current_release |