基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA03G555680 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr03:140664679-140665056 (+) |
| 描述 | Similar to KCS9: 3-ketoacyl-CoA synthase 9 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_010923 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 12 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g16280 |
参与C22至C24脂肪酸的延长;这些脂肪酸是角质层蜡、脂肪族木栓质及包括鞘脂和磷脂在内的膜脂的生物合成前体。 | |
At4g34510 |
对 C22 以下的饱和酰基 CoAs 具有活性。 | |
At1g19440 |
3-酮酰辅酶A合成酶 4。 | 暂无已核实直接文献 |
At4g34520 |
参与发育中种子中的脂肪酸延长和储存。 |
Engineering and mechanistic studies of the Arabidopsis FAE1 beta-ketoacyl-CoA synthase, FAE1 KCS.2002 · DOI: 10.1046/j.1432-1033.2002.03039.x Specific and differential inhibition of very-long-chain fatty acid elongases from Arabidopsis thaliana by different herbicides.2004 · DOI: 10.1073/pnas.0404600101 Substrate specificity of Arabidopsis 3-ketoacyl-CoA synthases.2006 · DOI: 10.1016/j.bbrc.2006.05.162 Natural variation in seed very long chain fatty acid content is controlled by a new isoform of KCS18 in Arabidopsis thaliana.2012 · DOI: 10.1371/journal.pone.0049261
|
At2g15090 |
3-酮酰辅酶A合成酶 8。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000038 | very long-chain fatty acid metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.207; 覆盖度=35.366; E 值=4.84e-10; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006633 | fatty acid biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.207; 覆盖度=35.366; E 值=4.84e-10; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.207; 覆盖度=35.366; E 值=4.84e-10; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.207; 覆盖度=35.366; E 值=4.84e-10; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030497 | fatty acid elongation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=75.862; 覆盖度=35.366; E 值=4.01e-09; UniProt GO evidence=IMP:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160062 | cutin-based cuticle development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.207; 覆盖度=35.366; E 值=4.84e-10; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.207; 覆盖度=35.366; E 值=4.84e-10; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.207; 覆盖度=35.366; E 值=4.84e-10; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.207; 覆盖度=35.366; E 值=4.84e-10; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.862; 覆盖度=35.366; E 值=1.66e-08; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=75.862; 覆盖度=35.366; E 值=4.01e-09; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009922 | fatty acid elongase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.207; 覆盖度=35.366; E 值=4.84e-10; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G19440 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=82.143; 覆盖度=34.146; E 值=1.85e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G16280 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.207; 覆盖度=35.366; E 值=4.84e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G34250 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=71.875; 覆盖度=39.024; E 值=2.17e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G34510 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=75.862; 覆盖度=35.366; E 值=4.01e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G34520 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.862; 覆盖度=35.366; E 值=1.66e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |