基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA02G052540 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr02:13723551-13725591 (-) |
| 描述 | Similar to UBP12: Ubiquitin carboxyl-terminal hydrolase 12 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_017320 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 13 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006508 | proteolysis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009867 | jasmonic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010078 | maintenance of root meristem identity | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016579 | protein deubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031647 | regulation of protein stability | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070646 | protein modification by small protein removal | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000280 | regulation of root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=38.636; 覆盖度=37.5; E 值=4.7e-13; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.077; 覆盖度=36.932; E 值=1.54e-11; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004843 | cysteine-type deubiquitinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G31390 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.069; 覆盖度=32.955; E 值=8.02e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G05420 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.077; 覆盖度=36.932; E 值=1.54e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G11910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=38.636; 覆盖度=37.5; E 值=4.7e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G06600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.632; 覆盖度=49.432; E 值=3.12e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release |