基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_038879 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr09:52383134-52385018 (-) |
| 描述 | Similar to PRP38: Pre-mRNA-splicing factor 38 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_038879 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 11 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000398 | mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=52.881; 覆盖度=82.865; E 值=7.2e-89; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.522; 覆盖度=51.685; E 值=1.04e-111; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.522; 覆盖度=51.685; E 值=1.04e-111; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010389 | regulation of G2/M transition of mitotic cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=52.881; 覆盖度=82.865; E 值=7.2e-89; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.522; 覆盖度=51.685; E 值=1.04e-111; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=64.362; 覆盖度=52.809; E 值=4.28e-88; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=52.881; 覆盖度=82.865; E 值=7.2e-89; UniProt GO evidence=IPI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071005 | U2-type precatalytic spliceosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=64.362; 覆盖度=52.809; E 值=4.28e-88; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071011 | precatalytic spliceosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.522; 覆盖度=51.685; E 值=1.04e-111; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071013 | catalytic step 2 spliceosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=52.881; 覆盖度=82.865; E 值=7.2e-89; UniProt GO evidence=HDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=64.362; 覆盖度=52.809; E 值=4.28e-88; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G40650 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.522; 覆盖度=51.685; E 值=1.04e-111 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG30342 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=52.881; 覆盖度=82.865; E 值=7.2e-89 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:84950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=64.362; 覆盖度=52.809; E 值=4.28e-88 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mcf:102116944 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=64.362; 覆盖度=52.809; E 值=4.28e-88 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100171974 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=64.362; 覆盖度=52.809; E 值=4.28e-88 | UniProtKB/Swiss-Prot DAT 2026 current_release |