基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_035589 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr08:25117655-25118095 (-) |
| 描述 | Similar to ATL18: RING-H2 finger protein ATL18 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_035589 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 20 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g38140 |
RING-H2 指蛋白 ATL18。 | 暂无已核实直接文献 |
At2g04240 |
在翻译后水平上对脱落酸稳态的作用,可能是通过泛素/蛋白酶体依赖性底物特异性降解。 | |
At1g72200 |
RING-H2指蛋白ATL11。 | 暂无已核实直接文献 |
At3g61460 |
可能参与油菜素甾醇信号通路并调节莲座叶的生长发育。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.833; 覆盖度=32.877; E 值=4.45e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006970 | response to osmotic stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.667; 覆盖度=49.315; E 值=4.21e-12; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.667; 覆盖度=49.315; E 值=4.21e-12; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009687 | abscisic acid metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.667; 覆盖度=49.315; E 值=4.21e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009688 | abscisic acid biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.667; 覆盖度=49.315; E 值=4.21e-12; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009739 | response to gibberellin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.667; 覆盖度=49.315; E 值=4.21e-12; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009741 | response to brassinosteroid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.211; 覆盖度=48.63; E 值=1.75e-10; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009742 | brassinosteroid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.211; 覆盖度=48.63; E 值=1.75e-10; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010200 | response to chitin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.211; 覆盖度=48.63; E 值=1.75e-10; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.315; 覆盖度=50.0; E 值=7.02e-15; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901371 | regulation of leaf morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.211; 覆盖度=48.63; E 值=1.75e-10; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905421 | regulation of plant organ morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.211; 覆盖度=48.63; E 值=1.75e-10; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.211; 覆盖度=48.63; E 值=1.75e-10; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.833; 覆盖度=32.877; E 值=4.45e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.541; 覆盖度=50.685; E 值=3.68e-10; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.833; 覆盖度=32.877; E 值=4.45e-11; UniProt GO evidence=ISS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.667; 覆盖度=49.315; E 值=4.21e-12; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.315; 覆盖度=50.0; E 值=7.02e-15; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.315; 覆盖度=50.0; E 值=7.02e-15; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.315; 覆盖度=50.0; E 值=7.02e-15; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G72200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=40.541; 覆盖度=50.685; E 值=3.68e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G04240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.667; 覆盖度=49.315; E 值=4.21e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G61460 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.211; 覆盖度=48.63; E 值=1.75e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G38140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.315; 覆盖度=50.0; E 值=7.02e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2541304 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.833; 覆盖度=32.877; E 值=4.45e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release |