基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_035206 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr08:17541501-17543760 (+) |
| 描述 | Similar to RVE6: Protein REVEILLE 6 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_035206 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 21 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g52660 |
可能的转录因子(通过同源推测)。 | 暂无已核实直接文献 |
At1g01520 |
可能的转录因子。 | 暂无已核实直接文献 |
At3g09600 |
含有晚间元素 的时钟控制基因的转录激活剂。 |
Functional implication of the MYB transcription factor RVE8/LCL5 in the circadian control of histone acetylation.2011 · DOI: 10.1111/j.1365-313x.2011.04484.x Histone acetylation and the circadian clock: a role for the MYB transcription factor RVE8/LCL5.2011 · DOI: 10.4161/psb.6.4.14837 REVEILLE8 and PSEUDO-REPONSE REGULATOR5 form a negative feedback loop within the Arabidopsis circadian clock.2011 · DOI: 10.1371/journal.pgen.1001350
|
At4g01280 |
可能的转录因子。 | 暂无已核实直接文献 |
At5g02840 |
可能的转录因子。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.094; 覆盖度=74.648; E 值=4.12e-89; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007623 | circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009637 | response to blue light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010099 | regulation of photomorphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010114 | response to red light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010628 | positive regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.094; 覆盖度=74.648; E 值=4.12e-89; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032922 | circadian regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042752 | regulation of circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042753 | positive regulation of circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.094; 覆盖度=74.648; E 值=4.12e-89; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043153 | entrainment of circadian clock by photoperiod | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.094; 覆盖度=74.648; E 值=4.12e-89; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048573 | photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.094; 覆盖度=74.648; E 值=4.12e-89; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000024 | regulation of leaf development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000028 | regulation of photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.667; 覆盖度=67.606; E 值=2.41e-81; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.667; 覆盖度=67.606; E 值=2.41e-81; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.094; 覆盖度=74.648; E 值=4.12e-89; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G01520 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.272; 覆盖度=78.592; E 值=2.48e-94 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G09600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.094; 覆盖度=74.648; E 值=4.12e-89 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G01280 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.987; 覆盖度=85.634; E 值=1.42e-88 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G02840 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.667; 覆盖度=67.606; E 值=2.41e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G52660 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.798; 覆盖度=92.113; E 值=2.09e-107 | UniProtKB/Swiss-Prot DAT 2026 current_release |