基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_034710 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr07:114455627-114459544 (+) |
| 描述 | Similar to TOP1A: DNA topoisomerase 1 alpha (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_034710 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 26 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g55300 |
通过暂时切割并重新连接DNA双链的一条链,释放DNA复制和转录过程中引入的超螺旋和扭转应力。 | |
At5g55310 |
通过暂时切割并重新连接DNA双链的一条链,释放DNA复制和转录过程中引入的超螺旋和扭转应力。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006260 | DNA replication | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006265 | DNA topological change | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007059 | chromosome segregation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009791 | post-embryonic development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009933 | meristem structural organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009965 | leaf morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010016 | shoot system morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010075 | regulation of meristem growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019827 | stem cell population maintenance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030261 | chromosome condensation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.122; 覆盖度=71.12; E 值=9.82e-170; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045995 | regulation of embryonic development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.122; 覆盖度=71.12; E 值=9.82e-170; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048439 | flower morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905393 | plant organ formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.122; 覆盖度=71.12; E 值=9.82e-170; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000791 | euchromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.122; 覆盖度=71.12; E 值=9.82e-170; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.122; 覆盖度=71.12; E 值=9.82e-170; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.122; 覆盖度=71.12; E 值=9.82e-170; UniProt GO evidence=HDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030874 | nucleolar chromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.122; 覆盖度=71.12; E 值=9.82e-170; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003916 | DNA topoisomerase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.122; 覆盖度=71.12; E 值=9.82e-170; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G55300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.558; 覆盖度=104.835; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G55310 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=62.753; 覆盖度=94.275; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0283205 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=48.316; 覆盖度=75.573; E 值=1.3e-177 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG6146 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.122; 覆盖度=71.12; E 值=9.82e-170 | UniProtKB/Swiss-Prot DAT 2026 current_release |