基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_028453 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr06:42251348-42255588 (-) |
| 描述 | Similar to diexf: Digestive organ expansion factor homolog (Xenopus tropicalis OX%3D8364) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_028453 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g17690 |
DEAD-box RNA解旋酶样蛋白,参与pre-18S rRNA加工,特别是在A0、A1和A2位点(通过相似性推测)。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.057; 覆盖度=94.259; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009303 | rRNA transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.057; 覆盖度=94.259; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009553 | embryo sac development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.057; 覆盖度=94.259; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.057; 覆盖度=94.259; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030163 | protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.394; 覆盖度=88.117; E 值=5.14e-125; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031648 | protein destabilization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.394; 覆盖度=88.117; E 值=5.14e-125; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040019 | positive regulation of embryonic development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.027; 覆盖度=89.853; E 值=8.41e-120; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902570 | protein localization to nucleolus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.394; 覆盖度=88.117; E 值=5.14e-125; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.057; 覆盖度=94.259; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.027; 覆盖度=89.853; E 值=8.41e-120; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.057; 覆盖度=94.259; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032040 | small-subunit processome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.057; 覆盖度=94.259; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.027; 覆盖度=89.853; E 值=8.41e-120; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019843 | rRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.057; 覆盖度=94.259; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034511 | U3 snoRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.057; 覆盖度=94.259; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G17690 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.057; 覆盖度=94.259; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:421384 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.175; 覆盖度=71.829; E 值=2.8e-117 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:27042 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.027; 覆盖度=89.853; E 值=8.41e-120 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:493397 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.394; 覆盖度=88.117; E 值=5.14e-125 | UniProtKB/Swiss-Prot DAT 2026 current_release |