基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_019732 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr04:38837839-38840708 (-) |
| 描述 | Similar to At4g38890: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_019732 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 11 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g38890 |
催化二氢尿苷的合成,二氢尿苷是一种存在于大多数tRNA D环中的修饰碱基。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os04g0117600 |
催化二氢尿苷的合成,二氢尿苷是一种存在于大多数tRNA D环中的修饰碱基。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002943 | tRNA dihydrouridine synthesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.605; 覆盖度=93.103; E 值=8.19e-175; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.045; 覆盖度=100.45; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006417 | regulation of translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.605; 覆盖度=93.103; E 值=8.19e-175; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.045; 覆盖度=100.45; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005773 | vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.045; 覆盖度=100.45; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.605; 覆盖度=93.103; E 值=8.19e-175; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.045; 覆盖度=100.45; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017150 | tRNA dihydrouridine synthase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.045; 覆盖度=100.45; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050660 | flavin adenine dinucleotide binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.045; 覆盖度=100.45; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0102265 | tRNA-dihydrouridine47 synthase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.045; 覆盖度=100.45; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106414 | mRNA dihydrouridine synthase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.045; 覆盖度=100.45; E 值=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G38890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.045; 覆盖度=100.45; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0117600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.594; 覆盖度=99.7; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:56931 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=46.422; 覆盖度=85.907; E 值=3.33e-172 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:379349 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.605; 覆盖度=93.103; E 值=8.19e-175 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:394959 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.024; 覆盖度=91.904; E 值=6.66e-173 | UniProtKB/Swiss-Prot DAT 2026 current_release |