基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_019121 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr04:24072705-24075215 (-) |
| 描述 | Similar to At3g54130: Ataxin-3 homolog (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_019121 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 49 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g54130 |
与转录的关键调控因子相互作用并抑制转录。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os01g0851400 |
与转录的关键调控因子相互作用并抑制转录。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000226 | microtubule cytoskeleton organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002181 | cytoplasmic translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.075; 覆盖度=89.037; E 值=2.17e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006289 | nucleotide-excision repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.328; 覆盖度=89.037; E 值=1.45e-43; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=66.292; 覆盖度=88.704; E 值=1.06e-114; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=66.292; 覆盖度=88.704; E 值=1.06e-114; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009267 | cellular response to starvation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.075; 覆盖度=89.037; E 值=2.17e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010810 | regulation of cell-substrate adhesion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016579 | protein deubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=66.292; 覆盖度=88.704; E 值=1.06e-114; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030036 | actin cytoskeleton organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031669 | cellular response to nutrient levels | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.075; 覆盖度=89.037; E 值=2.17e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034198 | cellular response to amino acid starvation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034605 | cellular response to heat | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035520 | monoubiquitinated protein deubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0038202 | TORC1 signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.075; 覆盖度=89.037; E 值=2.17e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=66.292; 覆盖度=88.704; E 值=1.06e-114; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045104 | intermediate filament cytoskeleton organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045947 | negative regulation of translational initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.075; 覆盖度=89.037; E 值=2.17e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045948 | positive regulation of translational initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.075; 覆盖度=89.037; E 值=2.17e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070536 | protein K63-linked deubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IDA:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071108 | protein K48-linked deubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IDA:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071218 | cellular response to misfolded protein | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904262 | negative regulation of TORC1 signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=66.292; 覆盖度=88.704; E 值=1.06e-114; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904263 | positive regulation of TORC1 signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.075; 覆盖度=89.037; E 值=2.17e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904294 | positive regulation of ERAD pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=66.292; 覆盖度=88.704; E 值=1.06e-114; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904327 | protein localization to cytosolic proteasome complex | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000060 | positive regulation of ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IDA:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=66.292; 覆盖度=88.704; E 值=1.06e-114; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.075; 覆盖度=89.037; E 值=2.17e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005759 | mitochondrial matrix | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.328; 覆盖度=89.037; E 值=1.45e-43; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IDA:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.075; 覆盖度=89.037; E 值=2.17e-43; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016363 | nuclear matrix | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031966 | mitochondrial membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042405 | nuclear inclusion body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.328; 覆盖度=89.037; E 值=1.45e-43; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001222 | transcription corepressor binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.328; 覆盖度=89.037; E 值=1.45e-43; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004843 | cysteine-type deubiquitinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=66.292; 覆盖度=88.704; E 值=1.06e-114; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031625 | ubiquitin protein ligase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IPI:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042826 | histone deacetylase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.328; 覆盖度=89.037; E 值=1.45e-43; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051117 | ATPase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IPI:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061578 | K63-linked deubiquitinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IDA:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990380 | K48-linked deubiquitinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44; UniProt GO evidence=IDA:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G54130 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=66.292; 覆盖度=88.704; E 值=1.06e-114 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0851400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=62.963; 覆盖度=89.701; E 值=7.65e-108 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:4287 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.294; 覆盖度=90.365; E 值=6.7e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:110616 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.075; 覆盖度=89.037; E 值=2.17e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:60331 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.328; 覆盖度=89.037; E 值=1.45e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release |