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基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDLXL04_012568
当前查询版本OH1004
位置Chr03:14766711-14770482 (+)
描述Similar to ELF6: Probable lysine-specific demethylase ELF6 (Arabidopsis thaliana OX%3D3702)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_012568 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 19 条 GO 注释和 3 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At5g04240 组蛋白去甲基酶，使组蛋白 H3 的“Lys-27” 去甲基化，从而充当基因表达的正调节因子。
Divergent roles of a pair of homologous jumonji/zinc-finger-class transcription factor proteins in the regulation of Arabidopsis flowering time.2004 · DOI: 10.1105/tpc.104.025353
Modulation of brassinosteroid-regulated gene expression by Jumonji domain-containing proteins ELF6 and REF6 in Arabidopsis.2008 · DOI: 10.1073/pnas.0802254105
Repression of FLOWERING LOCUS T chromatin by functionally redundant histone H3 lysine 4 demethylases in Arabidopsis.2009 · DOI: 10.1371/journal.pone.0008033
Epigenetic reprogramming that prevents transgenerational inheritance of the vernalized state.2014 · DOI: 10.1038/nature13722
A new role for histone demethylases in the maintenance of plant genome integrity.2020 · DOI: 10.7554/elife.58533
At3g48430 组蛋白去甲基化酶，去甲基化组蛋白 H3 的“赖氨酸-27”（H3K27me），从而作为基因表达的正调控因子。
Divergent roles of a pair of homologous jumonji/zinc-finger-class transcription factor proteins in the regulation of Arabidopsis flowering time.2004 · DOI: 10.1105/tpc.104.025353
Modulation of brassinosteroid-regulated gene expression by Jumonji domain-containing proteins ELF6 and REF6 in Arabidopsis.2008 · DOI: 10.1073/pnas.0802254105
Arabidopsis REF6 is a histone H3 lysine 27 demethylase.2011 · DOI: 10.1038/ng.854
Nuclear factor Y-mediated H3K27me3 demethylation of the SOC1 locus orchestrates flowering responses of Arabidopsis.2014 · DOI: 10.1038/ncomms5601
Concerted genomic targeting of H3K27 demethylase REF6 and chromatin-remodeling ATPase BRM in Arabidopsis.2016 · DOI: 10.1038/ng.3555
REF6 recognizes a specific DNA sequence to demethylate H3K27me3 and regulate organ boundary formation in Arabidopsis.2016 · DOI: 10.1038/ng.3556
An H3K27me3 demethylase-HSFA2 regulatory loop orchestrates transgenerational thermomemory in Arabidopsis.2019 · DOI: 10.1038/s41422-019-0145-8
DNA methylation repels targeting of Arabidopsis REF6.2019 · DOI: 10.1038/s41467-019-10026-1
Epigenetic silencing of a multifunctional plant stress regulator.2019 · DOI: 10.7554/elife.47835
Crystal structures of REF6 and its complex with DNA reveal diverse recognition mechanisms.2020 · DOI: 10.1038/s41421-020-0150-6
Dehydroabietinal promotes flowering time and plant defense in Arabidopsis via the autonomous pathway genes FLOWERING LOCUS D, FVE, and RELATIVE OF EARLY FLOWERING 6.2020 · DOI: 10.1093/jxb/eraa232
The H3K27me3 Demethylase RELATIVE OF EARLY FLOWERING6 Suppresses Seed Dormancy by Inducing Abscisic Acid Catabolism.2020 · DOI: 10.1104/pp.20.01255
A new role for histone demethylases in the maintenance of plant genome integrity.2020 · DOI: 10.7554/elife.58533
At5g46910 组蛋白去甲基化酶，可将组蛋白 H3 的“Lys-27” 去甲基化，对 H3K27me3 具有特定活性，并参与基因表达的调节。
The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.2019 · DOI: 10.1038/s41467-019-09310-x

水稻

参考基因 ID可能功能对应论文 / DOI
Os03g0151300 组蛋白去甲基化酶，可使组蛋白 H3 的“Lys-4” 去甲基化。
Se14, encoding a JmjC domain-containing protein, plays key roles in long-day suppression of rice flowering through the demethylation of H3K4me3 of RFT1.2014 · DOI: 10.1371/journal.pone.0096064
Os01g0907400 组蛋白去甲基化酶，去甲基化组蛋白H3的'Lys-27'（H3K27me），对H3K27me3和H3K27me2具有特异性活性。
Jumonji C domain protein JMJ705-mediated removal of histone H3 lysine 27 trimethylation is involved in defense-related gene activation in rice.2013 · DOI: 10.1105/tpc.113.118802

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0006338chromatin remodeling生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009741response to brassinosteroid生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009826unidimensional cell growth生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009908flower development生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=50.31; 覆盖度=57.627; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010219regulation of vernalization response生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010468regulation of gene expression生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010628positive regulation of gene expression生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0040029epigenetic regulation of gene expression生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045814negative regulation of gene expression, epigenetic生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=50.31; 覆盖度=57.627; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048577negative regulation of short-day photoperiodism, flowering生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048579negative regulation of long-day photoperiodism, flowering生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000785chromatin细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032452histone demethylase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=50.31; 覆盖度=57.627; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034647histone H3K4me/H3K4me2/H3K4me3 demethylase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071558histone H3K27me2/H3K27me3 demethylase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G04240KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.882; 覆盖度=75.825; E 值=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0151300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=50.31; 覆盖度=57.627; E 值=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:9268736KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=50.31; 覆盖度=57.627; E 值=0.0UniProtKB/Swiss-Prot DAT 2026 current_release