基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_005986 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:176669211-176671007 (-) |
| 描述 | Similar to PME68: Probable pectinesterase 68 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_005986 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 11 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g47500 |
通过细胞壁果胶的去甲基酯化作用来修饰细胞壁。 | 暂无已核实直接文献 |
At5g19730 |
通过细胞壁果胶的去甲基酯化作用来修饰细胞壁。 | 暂无已核实直接文献 |
At2g36710 |
通过细胞壁果胶的去甲基酯化作用来修饰细胞壁。 | 暂无已核实直接文献 |
At5g55590 |
细胞类型特异性果胶降解以分离小孢子所需的果胶酯酶。 |
Separation of Arabidopsis pollen tetrads is regulated by QUARTET1, a pectin methylesterase gene.2006 · DOI: 10.1104/pp.106.085274
|
At1g05310 |
通过细胞壁果胶的去甲基酯化作用来修饰细胞壁。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0009408 | response to heat | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.097; 覆盖度=85.251; E 值=1.02e-96; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.097; 覆盖度=85.251; E 值=1.02e-96; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010588 | cotyledon vascular tissue pattern formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.097; 覆盖度=85.251; E 值=1.02e-96; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042545 | cell wall modification | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=75.148; 覆盖度=99.705; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045490 | pectin catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=75.148; 覆盖度=99.705; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=75.148; 覆盖度=99.705; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.097; 覆盖度=85.251; E 值=1.02e-96; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.097; 覆盖度=85.251; E 值=1.02e-96; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.097; 覆盖度=85.251; E 值=1.02e-96; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.097; 覆盖度=85.251; E 值=1.02e-96; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030599 | pectinesterase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=75.148; 覆盖度=99.705; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G05310 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=45.161; 覆盖度=91.445; E 值=2.77e-89 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G36710 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=47.351; 覆盖度=89.086; E 值=5.32e-93 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G19730 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.097; 覆盖度=85.251; E 值=1.02e-96 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G47500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=75.148; 覆盖度=99.705; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G55590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=48.675; 覆盖度=89.086; E 值=8.8e-91 | UniProtKB/Swiss-Prot DAT 2026 current_release |