基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_005935 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:175906017-175908616 (+) |
| 描述 | Similar to ELP4: Elongator complex protein 4 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_005935 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 20 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g11220 |
延伸子复合物的组分,是mcm5U(5-甲氧羰基甲基尿苷)、mcm5s2U(5-甲氧羰基甲基-2-硫代尿苷)及ncm5U(5-氨甲酰甲基尿苷)等多种tRNA修饰所必需的(基于相似性推测)。 |
The elongata mutants identify a functional Elongator complex in plants with a role in cell proliferation during organ growth.2005 · DOI: 10.1073/pnas.0502600102 Cytological investigations of the Arabidopsis thaliana elo1 mutant give new insights into leaf lateral growth and Elongator function.2007 · DOI: 10.1093/aob/mcm102
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002098 | tRNA wobble uridine modification | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=25.556; 覆盖度=98.901; E 值=1.33e-24; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008284 | positive regulation of cell population proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009738 | abscisic acid-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010928 | regulation of auxin mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031538 | negative regulation of anthocyanin metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035265 | organ growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043609 | regulation of carbon utilization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071329 | cellular response to sucrose stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000024 | regulation of leaf development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.963; 覆盖度=104.945; E 值=3.17e-23; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008023 | transcription elongation factor complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=25.556; 覆盖度=98.901; E 值=1.33e-24; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033588 | elongator holoenzyme complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008607 | phosphorylase kinase regulator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.963; 覆盖度=104.945; E 值=3.17e-23; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G11220 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.192; 覆盖度=100.275; E 值=3.48e-147 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:614139 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=25.0; 覆盖度=91.209; E 值=2.29e-21 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0278783 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=24.566; 覆盖度=95.055; E 值=1.11e-21 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:77766 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.963; 覆盖度=104.945; E 值=3.17e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:495207 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=25.556; 覆盖度=98.901; E 值=1.33e-24 | UniProtKB/Swiss-Prot DAT 2026 current_release |