基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_001744 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:32280071-32281166 (+) |
| 描述 | Similar to EBS: Chromatin remodeling protein EBS (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_001744 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 30 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g22140 |
染色质重塑因子,可结合甲基化组蛋白(例如H3K4me2/3)以防止其乙酰化(例如H3K9K14Ac),可能通过招募组蛋白去乙酰化酶(HDAC)复合体,从而调节靶基因的转录。 | 暂无已核实直接文献 |
At4g39100 |
染色质重塑因子,结合甲基化组蛋白(例如 H3K4me2/3)以防止其乙酰化(例如 H3K9K14Ac),可能通过招募组蛋白去乙酰化酶(HDAC)复合物,从而调控靶基因转录。 | 暂无已核实直接文献 |
At4g04260 |
染色质重塑因子,结合甲基化组蛋白(例如 H3K4me2/3)以防止其乙酰化(例如 H3K9K14Ac),可能通过招募组蛋白去乙酰化酶(HDAC)复合物,从而调控靶基因转录。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006338 | chromatin remodeling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.662; 覆盖度=35.648; E 值=4.96e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.662; 覆盖度=35.648; E 值=4.96e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006482 | protein demethylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.975; 覆盖度=36.574; E 值=9.54e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009791 | post-embryonic development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009845 | seed germination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=66.667; 覆盖度=98.611; E 值=2.71e-107; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010628 | positive regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.975; 覆盖度=36.574; E 值=9.54e-12; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045814 | negative regulation of gene expression, epigenetic | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045815 | transcription initiation-coupled chromatin remodeling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.662; 覆盖度=35.648; E 值=4.96e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048579 | negative regulation of long-day photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061188 | negative regulation of rDNA heterochromatin formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.662; 覆盖度=35.648; E 值=4.96e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000028 | regulation of photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000776 | kinetochore | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.975; 覆盖度=36.574; E 值=9.54e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.975; 覆盖度=36.574; E 值=9.54e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=66.667; 覆盖度=98.611; E 值=2.71e-107; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003712 | transcription coregulator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.662; 覆盖度=35.648; E 值=4.96e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003713 | transcription coactivator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.975; 覆盖度=36.574; E 值=9.54e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005506 | iron ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.975; 覆盖度=36.574; E 值=9.54e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032452 | histone demethylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.662; 覆盖度=35.648; E 值=4.96e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032454 | histone H3K9 demethylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.975; 覆盖度=36.574; E 值=9.54e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035575 | histone H4K20 demethylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.662; 覆盖度=35.648; E 值=4.96e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051213 | dioxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.975; 覆盖度=36.574; E 值=9.54e-12; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140002 | histone H3K4me3 reader activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140678 | molecular function inhibitor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109; UniProt GO evidence=IMP:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G04260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=61.579; 覆盖度=87.963; E 值=4.14e-79 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G22140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.9; 覆盖度=96.759; E 值=4.71e-109 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G39100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=66.667; 覆盖度=98.611; E 值=2.71e-107 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:503778 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.662; 覆盖度=35.648; E 值=4.96e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release |