基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_000221 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:4189854-4192599 (-) |
| 描述 | Similar to At5g05130: Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_000221 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 36 条 GO 注释和 3 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g05130 |
具有内在的依赖 ATP 的核小体重塑活性。 | 暂无已核实直接文献 |
At5g22750 |
在无差错复制后 DNA 修复或 DNA 损伤耐受 途径中发挥作用。 |
A homolog of ScRAD5 is involved in DNA repair and homologous recombination in Arabidopsis.2008 · DOI: 10.1104/pp.108.116806 RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana.2010 · DOI: 10.1105/tpc.110.078568
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000209 | protein polyubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006325 | chromatin organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.152; 覆盖度=65.323; E 值=3.19e-138; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042789 | mRNA transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=IDA:NTNU_SB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070534 | protein K63-linked ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071168 | protein localization to chromatin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071932 | replication fork reversal | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0141119 | chromosomal DNA methylation maintenance following DNA replication | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.152; 覆盖度=65.323; E 值=3.19e-138; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.152; 覆盖度=65.323; E 值=3.19e-138; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016363 | nuclear matrix | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043596 | nuclear replication fork | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090575 | RNA polymerase II transcription regulator complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003676 | nucleic acid binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.152; 覆盖度=65.323; E 值=3.19e-138; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004386 | helicase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008094 | ATP-dependent activity, acting on DNA | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015616 | DNA translocase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031625 | ubiquitin protein ligase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0062072 | histone H3K9me2/3 reader activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140234 | histone H3K23 ubiquitin ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140658 | ATP-dependent chromatin remodeler activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160225 | G-quadruplex unwinding activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G05130 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.419; 覆盖度=99.078; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:6596 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.152; 覆盖度=65.323; E 值=3.19e-138 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:20585 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.253; 覆盖度=62.327; E 值=1.81e-139 | UniProtKB/Swiss-Prot DAT 2026 current_release |