Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkAUNG055110`
Query reference	TK1151
Location	ChrUn:15695512-15697396 (-)
Description	Similar to MYB101: Transcription factor MYB101 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_038186 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 25 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g60460`	Transcription activator that acts as a positive regulator of male germline development by promoting both gametic cell specification and cell cycle progression.	Male germ line development in Arabidopsis. duo pollen mutants reveal gametophytic regulators of generative cell cycle progression.2005 · DOI: 10.1104/pp.104.053165 A novel class of MYB factors controls sperm-cell formation in plants.2005 · DOI: 10.1016/j.cub.2005.01.013 A plant germline-specific integrator of sperm specification and cell cycle progression.2009 · DOI: 10.1371/journal.pgen.1000430 The R2R3 MYB transcription factor DUO1 activates a male germline-specific regulon essential for sperm cell differentiation in Arabidopsis.2011 · DOI: 10.1105/tpc.110.081059 An EAR-Dependent Regulatory Module Promotes Male Germ Cell Division and Sperm Fertility in Arabidopsis.2014 · DOI: 10.1105/tpc.114.124743
`At4g26930`	Transcription activator.	MYB97, MYB101 and MYB120 function as male factors that control pollen tube-synergid interaction in Arabidopsis thaliana fertilization.2013 · DOI: 10.1371/journal.pgen.1003933

Rice

Reference gene ID	Possible function	Papers / DOI
`Os04g0549500`	Probable transcription factor.	No verified direct reference in this release
`UniProt: A2WW87`	Transcriptional activator of gibberellin-dependent alpha-amylase expression in aleurone cells.	No verified direct reference in this release
`Os01g0812000`	Transcriptional activator of gibberellin-dependent alpha- amylase expression in aleurone cells.	Loss-of-function mutations of the rice GAMYB gene impair alpha-amylase expression in aleurone and flower development.2004 · DOI: 10.1105/tpc.017327 Gibberellin modulates anther development in rice via the transcriptional regulation of GAMYB.2009 · DOI: 10.1105/tpc.108.062935 Identification of gamyb-4 and analysis of the regulatory role of GAMYB in rice anther development.2010 · DOI: 10.1111/j.1744-7909.2010.00959.x Convergent starvation signals and hormone crosstalk in regulating nutrient mobilization upon germination in cereals.2012 · DOI: 10.1105/tpc.112.097741

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008285	negative regulation of cell population proliferation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.6; coverage=25.826; evalue=2.87e-61; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009555	pollen development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009723	response to ethylene	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.6; coverage=25.826; evalue=2.87e-61; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009735	response to cytokinin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.6; coverage=25.826; evalue=2.87e-61; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009739	response to gibberellin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009740	gibberellic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010468	regulation of gene expression	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030154	cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=76.692; coverage=27.479; evalue=1.5e-65; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043068	positive regulation of programmed cell death	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045893	positive regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045926	negative regulation of growth	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.6; coverage=25.826; evalue=2.87e-61; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048235	pollen sperm cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048653	anther development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=76.692; coverage=27.479; evalue=1.5e-65; UniProt GO evidence=IEA:EnsemblPlants	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048655	anther wall tapetum morphogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.6; coverage=25.826; evalue=2.87e-61; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080092	regulation of pollen tube growth	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901371	regulation of leaf morphogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990019	protein storage vacuole organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090406	pollen tube	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043565	sequence-specific DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.6; coverage=25.826; evalue=2.87e-61; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G32460	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.373; coverage=27.686; evalue=2.1e-66	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G26930	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.557; coverage=32.645; evalue=1.73e-65	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G06100	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.6; coverage=25.826; evalue=2.87e-61	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os01g0812000	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=76.692; coverage=27.479; evalue=1.65e-65	UniProtKB/Swiss-Prot DAT 2026 current_release