Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA08G234890`
Query reference	TK1151
Location	Chr08:61234987-61236723 (+)
Description	Similar to Glutamate--tRNA ligase%2C chloroplastic/mitochondrial (Nicotiana tabacum OX%3D4097)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_033146 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 16 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

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Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g18370`	Probable plus end-directed motor protein that functions in the NACK-PQR (ANP1-MKK6-MPK4) MAP kinase signaling pathway, which is essential for somatic cell cytokinesis, especially for the cell-plate formation and its expansion.	Expansion of the cell plate in plant cytokinesis requires a kinesin-like protein/MAPKKK complex.2002 · DOI: 10.1016/s0092-8674(02)00691-8 The AtNACK1/HINKEL and STUD/TETRASPORE/AtNACK2 genes, which encode functionally redundant kinesins, are essential for cytokinesis in Arabidopsis.2004 · DOI: 10.1111/j.1365-2443.2004.00798.x Arabidopsis kinesins HINKEL and TETRASPORE act redundantly to control cell plate expansion during cytokinesis in the male gametophyte.2008 · DOI: 10.1093/mp/ssn042 HINKEL kinesin, ANP MAPKKKs and MKK6/ANQ MAPKK, which phosphorylates and activates MPK4 MAPK, constitute a pathway that is required for cytokinesis in Arabidopsis thaliana.2010 · DOI: 10.1093/pcp/pcq135 Phosphorylation of a mitotic kinesin-like protein and a MAPKKK by cyclin-dependent kinases (CDKs) is involved in the transition to cytokinesis in plants.2011 · DOI: 10.1073/pnas.1110174108
`At3g43210`	Probable plus end-directed motor protein that functions in the NACK-PQR (ANP3-MKK6-MPK4) MAP kinase signaling pathway, which is essential for somatic cell cytokinesis, especially for the cell-plate formation and its expansion.	The AtNACK1/HINKEL and STUD/TETRASPORE/AtNACK2 genes, which encode functionally redundant kinesins, are essential for cytokinesis in Arabidopsis.2004 · DOI: 10.1111/j.1365-2443.2004.00798.x Arabidopsis kinesins HINKEL and TETRASPORE act redundantly to control cell plate expansion during cytokinesis in the male gametophyte.2008 · DOI: 10.1093/mp/ssn042 HINKEL kinesin, ANP MAPKKKs and MKK6/ANQ MAPKK, which phosphorylates and activates MPK4 MAPK, constitute a pathway that is required for cytokinesis in Arabidopsis thaliana.2010 · DOI: 10.1093/pcp/pcq135 AtMPK4 is required for male-specific meiotic cytokinesis in Arabidopsis.2011 · DOI: 10.1111/j.1365-313x.2011.04642.x

Rice

Reference gene ID	Possible function	Papers / DOI
`Os01g0513900`	May be essential to promote the progression of cytokinesis during node-internode differentiation.	The rice mutant dwarf bamboo shoot 1: a leaky mutant of the NACK-type kinesin-like gene can initiate organ primordia but not organ development.2005 · DOI: 10.1093/pcp/pci206

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006424	glutamyl-tRNA aminoacylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.024; coverage=51.572; evalue=5.28e-66; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007005	mitochondrion organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.031; coverage=51.258; evalue=1.36e-63; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009658	chloroplast organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.031; coverage=51.258; evalue=1.36e-63; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009791	post-embryonic development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.024; coverage=51.572; evalue=5.28e-66; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048481	plant ovule development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.031; coverage=51.258; evalue=1.36e-63; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048608	reproductive structure development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.024; coverage=51.572; evalue=5.28e-66; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.031; coverage=51.258; evalue=1.36e-63; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.024; coverage=51.572; evalue=5.28e-66; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.348; coverage=36.164; evalue=6.86e-47; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.024; coverage=51.572; evalue=5.28e-66; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009536	plastid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.031; coverage=51.258; evalue=1.36e-63; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009570	chloroplast stroma	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.031; coverage=51.258; evalue=1.36e-63; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000049	tRNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.024; coverage=51.572; evalue=5.28e-66; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004818	glutamate-tRNA ligase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.024; coverage=51.572; evalue=5.28e-66; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.024; coverage=51.572; evalue=5.28e-66; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008270	zinc ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.024; coverage=51.572; evalue=5.28e-66; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G64050	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.031; coverage=51.258; evalue=1.36e-63	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	fno:Fnod_0678	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.348; coverage=36.164; evalue=6.86e-47	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	fno:Fnod_0777	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.912; coverage=35.849; evalue=1.16e-46	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	nta:107784556	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.024; coverage=51.572; evalue=5.28e-66	UniProtKB/Swiss-Prot DAT 2026 current_release