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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA08G199400
Query referenceTK1151
LocationChr08:52082870-52085496 (-)
DescriptionSimilar to AP2-2: APETALA2-like protein 2 (Oryza sativa subsp. indica OX%3D39946)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_012653 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 15 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g36920 Probable transcriptional activator that promotes early floral meristem identity. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: B8B8J2 Probable transcription factor (By similarity). No verified direct reference in this release
Os07g0235800 Probable transcription factor (By similarity).
OsMADS1 Represses microRNA172 in Elongation of Palea/Lemma Development in Rice.2016 · DOI: 10.3389/fpls.2016.01891
UniProt: B8AXC3 Probable transcription factor (By similarity). No verified direct reference in this release
Os05g0121600 Probable transcription factor (By similarity).
Coexpression analysis identifies Rice Starch Regulator1, a rice AP2/EREBP family transcription factor, as a novel rice starch biosynthesis regulator.2010 · DOI: 10.1104/pp.110.159517

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.459; coverage=64.069; evalue=1.53e-101; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.459; coverage=64.069; evalue=2.99e-101; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009908flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.46; coverage=54.545; evalue=1.93e-95; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009909regulation of flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.459; coverage=64.069; evalue=1.53e-101; UniProt GO evidence=IEA:EnsemblPlantsUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010073meristem maintenanceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.46; coverage=54.545; evalue=1.93e-95; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010093specification of floral organ identityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.46; coverage=54.545; evalue=1.93e-95; UniProt GO evidence=IMP:CACAOUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010228vegetative to reproductive phase transition of meristemBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.459; coverage=64.069; evalue=1.53e-101; UniProt GO evidence=IEA:EnsemblPlantsUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030154cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.46; coverage=54.545; evalue=1.93e-95; UniProt GO evidence=TAS:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048316seed developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.46; coverage=54.545; evalue=1.93e-95; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048481plant ovule developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.46; coverage=54.545; evalue=1.93e-95; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080050regulation of seed developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.459; coverage=64.069; evalue=1.53e-101; UniProt GO evidence=IEA:EnsemblPlantsUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.459; coverage=64.069; evalue=1.53e-101; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.46; coverage=54.545; evalue=1.93e-95; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.459; coverage=64.069; evalue=1.53e-101; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.459; coverage=64.069; evalue=1.53e-101; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G36920KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.46; coverage=54.545; evalue=1.93e-95UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os07g0235800KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.708; coverage=84.632; evalue=9.16e-101UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4334582KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.459; coverage=64.069; evalue=2.99e-101UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4342787KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.708; coverage=84.632; evalue=9.16e-101UniProtKB/Swiss-Prot DAT 2026 current_release