RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDTkA08G194530
Query referenceTK1151
LocationChr08:50840689-50842886 (-)
DescriptionSimilar to PCRK2: Serine/threonine-protein kinase PCRK2 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032657 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 21 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g03320 Functions redundantly with PCRK1 in basal resistance against bacterial pathogens and in regulation of plant immunity. No verified direct reference in this release
At3g09830 Involved in the activation of early immune responses.
The receptor-like cytoplasmic kinase PCRK1 contributes to pattern-triggered immunity against Pseudomonas syringae in Arabidopsis thaliana.2015 · DOI: 10.1111/nph.13345
Functional characterization of PCRK1, a putative protein kinase with a role in immunity.2015 · DOI: 10.1080/15592324.2015.1063759
At1g07570 Possible bi-functional kinase.
Novel protein kinase of Arabidopsis thaliana (APK1) that phosphorylates tyrosine, serine and threonine.1992 · DOI: 10.1007/bf00046450
At5g02290 May play a role in the regulation of plant growth and development (Probable). No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os05g0110900 Functions downstream of CERK1 in the microbial peptidoglycans (PGNs) and fungal chitin signaling pathways that mediate innate immunity.
OsCERK1 and OsRLCK176 play important roles in peptidoglycan and chitin signaling in rice innate immunity.2014 · DOI: 10.1111/tpj.12710

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0002221pattern recognition receptor signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.652; coverage=92.244; evalue=2.1e-101; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006952defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.652; coverage=92.244; evalue=2.1e-101; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007165signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.119; coverage=90.582; evalue=1.6e-71; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007166cell surface receptor signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.119; coverage=90.582; evalue=1.6e-71; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009617response to bacteriumBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.897; coverage=108.033; evalue=6.98e-98; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010073meristem maintenanceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.119; coverage=90.582; evalue=1.6e-71; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010078maintenance of root meristem identityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.119; coverage=90.582; evalue=1.6e-71; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010088phloem developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.119; coverage=90.582; evalue=1.6e-71; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010492maintenance of shoot apical meristem identityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.119; coverage=90.582; evalue=1.6e-71; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031663lipopolysaccharide-mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.119; coverage=90.582; evalue=1.6e-71; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042742defense response to bacteriumBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.897; coverage=108.033; evalue=6.98e-98; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080142regulation of salicylic acid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.652; coverage=92.244; evalue=2.1e-101; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901653cellular response to peptideBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.119; coverage=90.582; evalue=1.6e-71; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000280regulation of root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.731; coverage=90.582; evalue=5.2e-71; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.731; coverage=90.582; evalue=5.2e-71; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.305; coverage=97.23; evalue=3.15e-73; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.897; coverage=108.033; evalue=6.98e-98; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.652; coverage=92.244; evalue=2.1e-101; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004674protein serine/threonine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.652; coverage=92.244; evalue=2.1e-101; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.652; coverage=92.244; evalue=2.1e-101; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0106310protein serine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.652; coverage=92.244; evalue=2.1e-101; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G26970KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.305; coverage=97.23; evalue=3.15e-73UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G09830KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.897; coverage=108.033; evalue=6.98e-98UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G28690KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.119; coverage=90.582; evalue=1.6e-71UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G03320KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.652; coverage=92.244; evalue=2.1e-101UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G15080KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.731; coverage=90.582; evalue=5.2e-71UniProtKB/Swiss-Prot DAT 2026 current_release