Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA08G190540 |
|---|---|
| Query reference | TK1151 |
| Location | Chr08:49783549-49786077 (+) |
| Description | Similar to RH38: DEAD-box ATP-dependent RNA helicase 38 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_032596 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 26 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g53110 |
ATP-dependent RNA helicase essential for mRNA export from the nucleus. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os03g0158200 |
ATP-dependent RNA helicase essential for mRNA export from the nucleus. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006406 | mRNA export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.071; coverage=67.354; evalue=2.31e-94; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006409 | tRNA export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.876; coverage=70.619; evalue=1.43e-94; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006415 | translational termination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.876; coverage=70.619; evalue=1.43e-94; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009408 | response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010467 | gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.071; coverage=67.354; evalue=2.31e-94; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.876; coverage=70.619; evalue=1.43e-94; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016973 | poly(A)+ mRNA export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051028 | mRNA transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.071; coverage=67.354; evalue=2.31e-94; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005643 | nuclear pore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.071; coverage=67.354; evalue=2.31e-94; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005934 | cellular bud tip | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.876; coverage=70.619; evalue=1.43e-94; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031965 | nuclear membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.876; coverage=70.619; evalue=1.43e-94; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044614 | nuclear pore cytoplasmic filaments | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.876; coverage=70.619; evalue=1.43e-94; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000822 | inositol hexakisphosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.876; coverage=70.619; evalue=1.43e-94; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.071; coverage=67.354; evalue=2.31e-94; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003724 | RNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008186 | ATP-dependent activity, acting on RNA | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.071; coverage=67.354; evalue=2.31e-94; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G53110 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.556; coverage=77.32; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cal:CAALFM_C301860CA | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.876; coverage=70.619; evalue=1.43e-94 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0158200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.665; coverage=74.399; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YOR046C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.071; coverage=67.354; evalue=2.31e-94 | UniProtKB/Swiss-Prot DAT 2026 current_release |