Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA08G061640 |
|---|---|
| Query reference | TK1151 |
| Location | Chr08:15772567-15772953 (-) |
| Description | Similar to NTL9: Protein NTM1-like 9 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029426 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 27 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g65700 |
LRR-rich receptor-like kinase (LRR-RLK) that, similarly to CLV1 and BAM3, participates in the detection of the CLAVATA-family peptides (e.g. CLE25, CLE26 and CLE45), and to the regulation of the triggered signaling required for protophloem differentiation and meristems maintenance through the phosphorylation of CIK proteins (CIKs) and of PBL34, PBL35 and PBL36. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002230 | positive regulation of defense response to virus by host | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.494; coverage=72.913; evalue=1.33e-82; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002237 | response to molecule of bacterial origin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.494; coverage=72.913; evalue=1.33e-82; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009615 | response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.494; coverage=72.913; evalue=1.33e-82; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016032 | viral process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.494; coverage=72.913; evalue=1.33e-82; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031347 | regulation of defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051607 | defense response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.494; coverage=72.913; evalue=1.33e-82; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070417 | cellular response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.709; coverage=76.623; evalue=1.32e-78; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071456 | cellular response to hypoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.494; coverage=72.913; evalue=1.33e-82; UniProt GO evidence=HEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071470 | cellular response to osmotic stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090602 | sieve element enucleation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.331; coverage=29.128; evalue=3.35e-62; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090603 | sieve element differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.331; coverage=29.128; evalue=3.35e-62; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098542 | defense response to other organism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.709; coverage=76.623; evalue=1.32e-78; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900103 | positive regulation of endoplasmic reticulum unfolded protein response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.709; coverage=76.623; evalue=1.32e-78; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900426 | positive regulation of defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.494; coverage=72.913; evalue=1.33e-82; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.634; coverage=35.436; evalue=2.18e-84; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.494; coverage=72.913; evalue=1.33e-82; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003713 | transcription coactivator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.494; coverage=72.913; evalue=1.33e-82; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005516 | calmodulin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G33060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.634; coverage=35.436; evalue=2.18e-84 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G49530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.709; coverage=76.623; evalue=1.32e-78 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G35580 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.381; coverage=77.922; evalue=2.87e-104 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G17260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.331; coverage=29.128; evalue=3.35e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G24590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.494; coverage=72.913; evalue=1.33e-82 | UniProtKB/Swiss-Prot DAT 2026 current_release |