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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA08G035880
Query referenceTK1151
LocationChr08:9153701-9156413 (+)
DescriptionSimilar to LIP1P: Lipoyl synthase%2C chloroplastic (Ricinus communis OX%3D3988)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_017974 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 7 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g08415 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (By similarity).
The biosynthetic pathway for lipoic acid is present in plastids and mitochondria in Arabidopsis thaliana.2002 · DOI: 10.1016/s0014-5793(02)02589-9
Two redundant octanoyltransferases and one obligatory lipoyl synthase provide protein-lipoylation autonomy to plastids of Arabidopsis.2014 · DOI: 10.1111/plb.12028

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: B8AA76 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009107lipoate biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.034; coverage=87.879; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009249protein lipoylationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.034; coverage=87.879; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.034; coverage=87.879; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.034; coverage=87.879; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016992lipoate synthase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.034; coverage=87.879; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.034; coverage=87.879; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00515394 iron, 4 sulfur cluster bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.034; coverage=87.879; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G08415KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.325; coverage=97.222; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGpop:18108579KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.627; coverage=83.838; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrcu:8279195KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.034; coverage=87.879; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release