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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA07G064620
Query referenceTK1151
LocationChr07:17066460-17069724 (-)
DescriptionSimilar to Klhdc3: Kelch domain-containing protein 3 (Mus musculus OX%3D10090)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_008713 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 10 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g05420 Binds medium- and long-chain acyl-CoA esters with very high affinity.
ACBP4 and ACBP5, novel Arabidopsis acyl-CoA-binding proteins with kelch motifs that bind oleoyl-CoA.2004 · DOI: 10.1007/s11103-004-0642-z
Arabidopsis acyl-CoA-binding proteins ACBP4 and ACBP5 are subcellularly localized to the cytosol and ACBP4 depletion affects membrane lipid composition.2008 · DOI: 10.1007/s11103-008-9392-7
At5g27630 Binds medium- and long-chain acyl-CoA esters with very high affinity.
ACBP4 and ACBP5, novel Arabidopsis acyl-CoA-binding proteins with kelch motifs that bind oleoyl-CoA.2004 · DOI: 10.1007/s11103-004-0642-z

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0016567protein ubiquitinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34; UniProt GO evidence=IEA:UniProtKB-UniPathwayUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043161proteasome-mediated ubiquitin-dependent protein catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051321meiotic cell cycleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140627ubiquitin-dependent protein catabolic process via the C-end degron rule pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000785chromatinCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031462Cul2-RING ubiquitin ligase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003682chromatin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990756ubiquitin-like ligase-substrate adaptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:71765KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.473; coverage=61.455; evalue=8.81e-34UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrno:363192KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.473; coverage=61.455; evalue=9.63e-34UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGxla:447194KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.796; coverage=52.545; evalue=1.01e-33UniProtKB/Swiss-Prot DAT 2026 current_release