Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA07G020580 |
|---|---|
| Query reference | TK1151 |
| Location | Chr07:5561400-5562496 (+) |
| Description | Similar to XBAT35: Putative E3 ubiquitin-protein ligase XBAT35 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_023095 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 19 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g23280 |
No E3 ubiquitin-protein ligase activity observed when associated with the E2 enzyme UBC8 in vitro. | No verified direct reference in this release |
At4g14365 |
No E3 ubiquitin-protein ligase activity observed when associated with the E2 enzyme UBC8 in vitro. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os07g0446100 |
Probable E3 ubiquitin-protein ligase XBOS34. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006457 | protein folding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009791 | post-embryonic development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.812; coverage=105.286; evalue=1.42e-178; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043067 | regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.812; coverage=105.286; evalue=1.42e-178; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045036 | protein targeting to chloroplast | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070417 | cellular response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.812; coverage=105.286; evalue=1.42e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.812; coverage=105.286; evalue=1.42e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.812; coverage=105.286; evalue=1.42e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009707 | chloroplast outer membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.812; coverage=105.286; evalue=1.42e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.812; coverage=105.286; evalue=1.42e-178; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030941 | chloroplast targeting sequence binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051861 | glycolipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.812; coverage=105.286; evalue=1.42e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G23280 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.812; coverage=105.286; evalue=1.42e-178 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G14365 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.106; coverage=70.925; evalue=3.94e-103 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G35450 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.2; coverage=27.533; evalue=3.43e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0446100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.558; coverage=116.52; evalue=6.97e-151 | UniProtKB/Swiss-Prot DAT 2026 current_release |