Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA06G270650`
Query reference	TK1151
Location	Chr06:68689076-68694648 (+)
Description	Similar to At1g13580: LAG1 longevity assurance homolog 3 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_011137 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 8 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g13580`	Essential for plant growth, promotes cell division in root meristems.	Disruption of the ceramide synthase LOH1 causes spontaneous cell death in Arabidopsis thaliana.2011 · DOI: 10.1111/j.1469-8137.2011.03852.x Unsaturation of very-long-chain ceramides protects plant from hypoxia-induced damages by modulating ethylene signaling in Arabidopsis.2015 · DOI: 10.1371/journal.pgen.1005143 Overexpression of Arabidopsis Ceramide Synthases Differentially Affects Growth, Sphingolipid Metabolism, Programmed Cell Death, and Mycotoxin Resistance.2015 · DOI: 10.1104/pp.15.00987 Substrate specificity, kinetic properties and inhibition by fumonisin B1 of ceramide synthase isoforms from Arabidopsis.2016 · DOI: 10.1042/bj20150824
`At3g25540`	Essential for plant growth, promotes cell division in root meristems.	Disruption of the ceramide synthase LOH1 causes spontaneous cell death in Arabidopsis thaliana.2011 · DOI: 10.1111/j.1469-8137.2011.03852.x Unsaturation of very-long-chain ceramides protects plant from hypoxia-induced damages by modulating ethylene signaling in Arabidopsis.2015 · DOI: 10.1371/journal.pgen.1005143 Overexpression of Arabidopsis Ceramide Synthases Differentially Affects Growth, Sphingolipid Metabolism, Programmed Cell Death, and Mycotoxin Resistance.2015 · DOI: 10.1104/pp.15.00987 Substrate specificity, kinetic properties and inhibition by fumonisin B1 of ceramide synthase isoforms from Arabidopsis.2016 · DOI: 10.1042/bj20150824

Rice

Reference gene ID	Possible function	Papers / DOI
`Os02g0581300`	Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis.	No verified direct reference in this release
`Os02g0728300`	Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006665	sphingolipid metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.627; coverage=64.578; evalue=2.69e-145; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010256	endomembrane system organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.627; coverage=64.578; evalue=2.69e-145; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042761	very long-chain fatty acid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.627; coverage=64.578; evalue=2.69e-145; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046513	ceramide biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.627; coverage=64.578; evalue=2.69e-145; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000012	regulation of auxin polar transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.627; coverage=64.578; evalue=2.69e-145; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.627; coverage=64.578; evalue=2.69e-145; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.627; coverage=64.578; evalue=2.69e-145; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050291	sphingosine N-acyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.627; coverage=64.578; evalue=2.69e-145; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G13580	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.627; coverage=64.578; evalue=2.69e-145	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os02g0581300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.776; coverage=64.578; evalue=7.18e-133	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	sly:543781	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.434; coverage=63.855; evalue=8.08e-136	UniProtKB/Swiss-Prot DAT 2026 current_release