Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA06G004480 |
|---|---|
| Query reference | TK1151 |
| Location | Chr06:1082296-1082700 (+) |
| Description | Similar to KEG: E3 ubiquitin-protein ligase KEG (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026568 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 41 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g13530 |
Mediates E2-dependent protein ubiquitination. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000209 | protein polyubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.483; coverage=64.925; evalue=1.4e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002224 | toll-like receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.483; coverage=64.925; evalue=1.4e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009738 | abscisic acid-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009788 | negative regulation of abscisic acid-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010508 | positive regulation of autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.483; coverage=64.925; evalue=1.4e-06; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016197 | endosomal transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031401 | positive regulation of protein modification process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.585; coverage=61.194; evalue=4.7e-07; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032940 | secretion by cell | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034141 | positive regulation of toll-like receptor 3 signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.483; coverage=64.925; evalue=1.4e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.483; coverage=64.925; evalue=1.4e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045324 | late endosome to vacuole transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048589 | developmental growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061351 | neural precursor cell proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.483; coverage=64.925; evalue=1.4e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070534 | protein K63-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.483; coverage=64.925; evalue=1.4e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IDA:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IDA:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005769 | early endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.483; coverage=64.925; evalue=1.4e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005802 | trans-Golgi network | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003924 | GTPase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IDA:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004672 | protein kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005525 | GTP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IDA:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008047 | enzyme activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019003 | GDP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IDA:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G13530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.957; coverage=103.731; evalue=1.14e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:373 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.99; coverage=72.388; evalue=3.73e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:55992 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.483; coverage=64.925; evalue=1.4e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:81003 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.585; coverage=61.194; evalue=5.27e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:81002 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.585; coverage=61.194; evalue=4.7e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release |