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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA05G378080
Query referenceTK1151
LocationChr05:93925524-93926798 (-)
DescriptionSimilar to BRO1: Vacuolar-sorting protein BRO1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_021292 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 23 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g15130 Class E VPS protein involved in concentration and sorting of cargo proteins of the multivesicular body (MVB) for incorporation into intralumenal vesicles.
Arabidopsis ALIX is required for the endosomal localization of the deubiquitinating enzyme AMSH3.2015 · DOI: 10.1073/pnas.1510516112
ESCRT-III-Associated Protein ALIX Mediates High-Affinity Phosphate Transporter Trafficking to Maintain Phosphate Homeostasis in Arabidopsis.2015 · DOI: 10.1105/tpc.15.00393

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0003094glomerular filtrationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IMP:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007033vacuole organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007165signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009653anatomical structure morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.276; coverage=70.048; evalue=5.54e-09; UniProt GO evidence=IMP:dictyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019722calcium-mediated signalingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.276; coverage=70.048; evalue=5.54e-09; UniProt GO evidence=IMP:dictyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0036257multivesicular body organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043328protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045881positive regulation of sporulation resulting in formation of a cellular sporeBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.276; coverage=70.048; evalue=5.54e-09; UniProt GO evidence=IMP:dictyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048041focal adhesion assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IMP:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051497negative regulation of stress fiber assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0097018renal albumin absorptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IMP:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0099638endosome to plasma membrane protein transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0120039plasma membrane bounded cell projection morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IMP:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005768endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005770late endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005771multivesicular bodyCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030659cytoplasmic vesicle membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.276; coverage=70.048; evalue=5.54e-09; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071944cell peripheryCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043130ubiquitin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G15130KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.925; coverage=64.734; evalue=5.83e-50UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGddi:DDB_G0275451KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.276; coverage=70.048; evalue=5.54e-09UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:14787KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.496; coverage=68.116; evalue=5.06e-10UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGncr:NCU08001KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.343; coverage=64.734; evalue=4.62e-10UniProtKB/Swiss-Prot DAT 2026 current_release