Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA05G164310`
Query reference	TK1151
Location	Chr05:42244262-42246994 (-)
Description	Protein of unknown function
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_020588 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 11 GO annotations and 1 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g19560`	Involved in the regulation of ethylene response.	The eer5 mutation, which affects a novel proteasome-related subunit, indicates a prominent role for the COP9 signalosome in resetting the ethylene-signaling pathway in Arabidopsis.2008 · DOI: 10.1111/j.1365-313x.2008.03521.x Arabidopsis homolog of the yeast TREX-2 mRNA export complex: components and anchoring nucleoporin.2010 · DOI: 10.1111/j.1365-313x.2009.04048.x

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0000973	post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006368	transcription elongation by RNA polymerase II	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009723	response to ethylene	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009873	ethylene-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016973	poly(A)+ mRNA export from nucleus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048364	root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0070390	transcription export complex 2	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003690	double-stranded DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003723	RNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G19560	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.684; coverage=42.222; evalue=5.65e-12	UniProtKB/Swiss-Prot DAT 2026 current_release