Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA05G038920 |
|---|---|
| Query reference | TK1151 |
| Location | Chr05:10536841-10538942 (+) |
| Description | Similar to TRB3: Telomere repeat-binding factor 3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_019299 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 41 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g49850 |
Binds preferentially double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand. | |
At1g72740 |
Binds preferentially double-stranded telomeric repeats. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000723 | telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006278 | RNA-templated DNA biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006334 | nucleosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016233 | telomere capping | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031627 | telomeric loop formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031848 | protection from non-homologous end joining at telomere | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032204 | regulation of telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032205 | negative regulation of telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032206 | positive regulation of telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032208 | negative regulation of telomere maintenance via recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032210 | regulation of telomere maintenance via telomerase | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032211 | negative regulation of telomere maintenance via telomerase | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032214 | negative regulation of telomere maintenance via semi-conservative replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=NAS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061820 | telomeric D-loop disassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IGI:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070198 | protein localization to chromosome, telomeric region | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090398 | cellular senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=NAS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903824 | negative regulation of telomere single strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=NAS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904354 | negative regulation of telomere capping | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904357 | negative regulation of telomere maintenance via telomere lengthening | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904430 | negative regulation of t-circle formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905839 | negative regulation of telomeric D-loop disassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000773 | negative regulation of cellular senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.057; coverage=13.766; evalue=2.86e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000783 | nuclear telomere cap complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000786 | nucleosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001673 | male germ cell nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070187 | shelterin complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003691 | double-stranded telomeric DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IPI:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042162 | telomeric DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043047 | single-stranded telomeric DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IPI:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098505 | G-rich strand telomeric DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G49850 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.943; coverage=13.766; evalue=3.11e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:7014 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.17; coverage=13.766; evalue=9.39e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:542123 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.057; coverage=13.766; evalue=2.86e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:542124 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.923; coverage=13.506; evalue=1.04e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:542125 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.17; coverage=13.766; evalue=4.93e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |