Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA04G478230 |
|---|---|
| Query reference | TK1151 |
| Location | Chr04:120812694-120821183 (+) |
| Description | Similar to PDR3: Pleiotropic drug resistance protein 3 (Nicotiana tabacum OX%3D4097) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_038926 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 22 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g53480 |
Together with ABCG36, regulates auxin homeostasis and responses by playing a dual role in coumarin (and derivatives) and in the auxin precursor indole 3-butyric acid (IBA) efflux transport, thus influencing roots and root hairs development. |
Arabidopsis PIS1 encodes the ABCG37 transporter of auxinic compounds including the auxin precursor indole-3-butyric acid.2010 · DOI: 10.1073/pnas.1005878107
|
At2g37280 |
May be a general defense protein. | No verified direct reference in this release |
At4g15215 |
May be a general defense protein. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os02g0528900 |
May be a general defense protein. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009804 | coumarin metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009926 | auxin polar transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010164 | response to cesium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018901 | 2,4-dichlorophenoxyacetic acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055085 | transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071366 | cellular response to indolebutyric acid stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140352 | export from cell | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140964 | intracellular auxin homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990641 | response to iron ion starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990748 | cellular detoxification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.463; coverage=97.169; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.947; coverage=100.069; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.947; coverage=100.069; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010329 | auxin efflux transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015562 | efflux transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.947; coverage=100.069; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042626 | ATPase-coupled transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140359 | ABC-type transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.947; coverage=100.069; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G37280 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.463; coverage=97.169; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G53480 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.522; coverage=100.552; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G15215 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.865; coverage=97.376; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0528900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.539; coverage=97.307; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |