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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA04G460840
Query referenceTK1151
LocationChr04:116214640-116227883 (-)
DescriptionSimilar to CNGC2: Cyclic nucleotide-gated ion channel 2 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_038740 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 19 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g15410 Acts as a cyclic nucleotide-gated ion channel.
The Arabidopsis dnd1 "defense, no death" gene encodes a mutated cyclic nucleotide-gated ion channel.2000 · DOI: 10.1073/pnas.150005697
Developmentally regulated expression of a cyclic nucleotide-gated ion channel from Arabidopsis indicates its involvement in programmed cell death.2001 · DOI: 10.1007/s004250000510
At5g54250 Acts as a cyclic nucleotide-gated ion channel.
HLM1, an essential signaling component in the hypersensitive response, is a member of the cyclic nucleotide-gated channel ion channel family.2003 · DOI: 10.1105/tpc.006999
At1g15990 Putative cyclic nucleotide-gated ion channel. No verified direct reference in this release
At4g01010 Putative cyclic nucleotide-gated ion channel. No verified direct reference in this release
At4g30360 Probable cyclic nucleotide-gated ion channel.
Phytosulfokine Regulates Growth in Arabidopsis through a Response Module at the Plasma Membrane That Includes CYCLIC NUCLEOTIDE-GATED CHANNEL17, H+-ATPase, and BAK1.2015 · DOI: 10.1105/tpc.15.00306

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006952defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007263nitric oxide mediated signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009626plant-type hypersensitive responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009860pollen tube growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.153; coverage=79.778; evalue=2.93e-128; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070509calcium ion importBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.544; coverage=87.396; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090406pollen tubeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.153; coverage=79.778; evalue=2.93e-128; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005216monoatomic ion channel activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.544; coverage=87.396; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005221intracellularly cyclic nucleotide-activated monoatomic cation channel activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005222intracellularly cAMP-activated cation channel activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005242inward rectifier potassium channel activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005249voltage-gated potassium channel activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.153; coverage=79.778; evalue=2.93e-128; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005262calcium channel activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005516calmodulin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008324monoatomic cation transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.544; coverage=87.396; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030552cAMP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030553cGMP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G15990KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.153; coverage=79.778; evalue=2.93e-128UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G19780KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.979; coverage=79.778; evalue=1.65e-125UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G30560KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=36.332; coverage=80.055; evalue=2.6e-125UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G15410KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.895; coverage=95.291; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G54250KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.544; coverage=87.396; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release