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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA04G307850
Query referenceTK1151
LocationChr04:77667342-77673603 (+)
DescriptionSimilar to RH32: DEAD-box ATP-dependent RNA helicase 32 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_037433 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 9 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g54910 DEAD-box ATP-dependent RNA helicase 32. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0517000 DEAD-box ATP-dependent RNA helicase 32. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006364rRNA processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.39; coverage=101.213; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.39; coverage=101.213; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.39; coverage=101.213; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032040small-subunit processomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.014; coverage=88.005; evalue=0.0; UniProt GO evidence=IEA:EnsemblFungiUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.39; coverage=101.213; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003724RNA helicase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.39; coverage=101.213; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.39; coverage=101.213; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016887ATP hydrolysis activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.39; coverage=101.213; evalue=0.0; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.014; coverage=88.005; evalue=0.0; UniProt GO evidence=IEA:EnsemblFungiUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGafm:AFUA_6G11070KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.326; coverage=59.973; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G54910KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.39; coverage=101.213; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGddi:DDB_G0284017KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.069; coverage=68.059; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os07g0517000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.176; coverage=106.334; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGncr:NCU04439KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.014; coverage=88.005; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release