Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA04G157230 |
|---|---|
| Query reference | TK1151 |
| Location | Chr04:40717340-40719186 (+) |
| Description | Similar to FAMA: Transcription factor FAMA (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_014554 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 20 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g53210 |
Transcription factor acting as an integration node for stomata and brassinosteroid (BR) signaling pathways to control stomatal initiation and development. |
Transcription factor control of asymmetric cell divisions that establish the stomatal lineage.2007 · DOI: 10.1038/nature05491 Termination of asymmetric cell division and differentiation of stomata.2007 · DOI: 10.1038/nature05467 SCREAM/ICE1 and SCREAM2 specify three cell-state transitional steps leading to arabidopsis stomatal differentiation.2008 · DOI: 10.1105/tpc.108.060848 Phosphorylation of Serine 186 of bHLH Transcription Factor SPEECHLESS Promotes Stomatal Development in Arabidopsis.2015 · DOI: 10.1016/j.molp.2014.12.014
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.335; coverage=48.798; evalue=1.24e-45; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.335; coverage=48.798; evalue=1.24e-45; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010052 | guard cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010374 | stomatal complex development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010377 | guard cell fate commitment | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010444 | guard mother cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045597 | positive regulation of cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051782 | negative regulation of cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090547 | response to low humidity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090627 | plant epidermal cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.615; coverage=46.875; evalue=3.16e-46; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.723; coverage=51.202; evalue=1.45e-41; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.615; coverage=46.875; evalue=3.16e-46; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.335; coverage=48.798; evalue=1.24e-45; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.335; coverage=48.798; evalue=1.24e-45; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046983 | protein dimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G22490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.335; coverage=48.798; evalue=1.24e-45 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G72210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.439; coverage=49.279; evalue=9.85e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G06120 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.615; coverage=46.875; evalue=3.16e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G24140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.863; coverage=98.077; evalue=1.15e-138 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G01460 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.723; coverage=51.202; evalue=1.45e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release |