Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA04G080930 |
|---|---|
| Query reference | TK1151 |
| Location | Chr04:21249060-21251738 (-) |
| Description | Similar to LAC11: Laccase-11 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_027589 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 9 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g38080 |
Lignin degradation and detoxification of lignin-derived products (By similarity). | No verified direct reference in this release |
At5g01190 |
Lignin degradation and detoxification of lignin-derived products. | No verified direct reference in this release |
At5g58910 |
Lignin degradation and detoxification of lignin-derived products. | No verified direct reference in this release |
At5g03260 |
Lignin degradation and detoxification of lignin-derived products. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os11g0708100 |
Lignin degradation and detoxification of lignin-derived products. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009809 | lignin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.311; coverage=97.876; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009834 | plant-type secondary cell wall biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.928; coverage=98.053; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046274 | lignin catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.311; coverage=97.876; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.311; coverage=97.876; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.928; coverage=98.053; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.311; coverage=97.876; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005507 | copper ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.311; coverage=97.876; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016491 | oxidoreductase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.311; coverage=97.876; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052716 | hydroquinone:oxygen oxidoreductase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.311; coverage=97.876; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G38080 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.928; coverage=98.053; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G03260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.311; coverage=97.876; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G58910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=57.371; coverage=99.646; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:107276614 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.659; coverage=94.513; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |