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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA03G525980
Query referenceTK1151
LocationChr03:132039151-132043447 (-)
DescriptionSimilar to SSRP1: FACT complex subunit SSRP1 (Vicia faba OX%3D3906)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_010406 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 14 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g28730 Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes.
The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome.2004 · DOI: 10.1111/j.1365-313x.2004.02242.x

Rice

Reference gene IDPossible functionPapers / DOI
Os01g0184900 Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. No verified direct reference in this release
Os05g0182600 Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000741karyogamyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.96; coverage=100.62; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006260DNA replicationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.14; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006281DNA repairBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.14; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.14; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010197polar nucleus fusionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.96; coverage=100.62; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010228vegetative to reproductive phase transition of meristemBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.96; coverage=100.62; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048731system developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.14; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000791euchromatinCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.96; coverage=100.62; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.96; coverage=100.62; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035101FACT complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.14; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.14; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.96; coverage=100.62; evalue=0.0; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031491nucleosome bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.14; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042393histone bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.14; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G28730KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.96; coverage=100.62; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os01g0184900KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=69.066; coverage=101.24; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release