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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA03G487730
Query referenceTK1151
LocationChr03:122047279-122050188 (-)
DescriptionSimilar to IMP3: Inositol monophosphatase 3 (Solanum lycopersicum OX%3D4081)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009982 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 14 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g02870 Phosphatase acting on L-galactose 1-phosphate (L-Gal 1-P), D- myoinositol 3-phosphate (D-Ins 3-P) and D-myoinositol 1-phosphate (D- Ins 1-P).
A highly specific L-galactose-1-phosphate phosphatase on the path to ascorbate biosynthesis.2004 · DOI: 10.1073/pnas.0407453101
Arabidopsis thaliana VTC4 encodes L-galactose-1-P phosphatase, a plant ascorbic acid biosynthetic enzyme.2006 · DOI: 10.1074/jbc.m601409200
VTC4 is a bifunctional enzyme that affects myoinositol and ascorbate biosynthesis in plants.2009 · DOI: 10.1104/pp.108.135129

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006020inositol metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.357; coverage=96.22; evalue=4.3e-154; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006021inositol biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.357; coverage=96.22; evalue=4.3e-154; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007165signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.357; coverage=96.22; evalue=4.3e-154; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009409response to coldBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.143; coverage=96.22; evalue=1.43e-151; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019853L-ascorbic acid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.143; coverage=96.22; evalue=1.43e-151; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046854phosphatidylinositol phosphate biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.357; coverage=96.22; evalue=4.3e-154; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.143; coverage=96.22; evalue=1.43e-151; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.143; coverage=96.22; evalue=1.43e-151; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.143; coverage=96.22; evalue=1.43e-151; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000287magnesium ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.357; coverage=96.22; evalue=4.3e-154; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008934inositol monophosphate 1-phosphatase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.357; coverage=96.22; evalue=4.3e-154; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010347L-galactose-1-phosphate phosphatase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.143; coverage=96.22; evalue=1.43e-151; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.143; coverage=96.22; evalue=1.43e-151; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0052834inositol monophosphate phosphatase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.357; coverage=96.22; evalue=4.3e-154; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G02870KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.143; coverage=96.22; evalue=1.43e-151UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsly:544013KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.357; coverage=96.22; evalue=4.3e-154UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsly:544014KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.751; coverage=96.564; evalue=3.27e-143UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsly:544280KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=72.954; coverage=96.564; evalue=6.34e-149UniProtKB/Swiss-Prot DAT 2026 current_release